Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
FoldalignM
CPU time: 170.27
Average sequence ID: 0.543258558243
Average free energy: -34.1692307692
Average covariation: 0.340807692308
Average basepair probability: 0.742432986314
Canonical basepairs: NA

Sequence and structure consensus for FoldalignM
RRAAGAMYCYCAKSCUGUGMCCCYCYARRGGGAAmmGCVCUUUYUGUUGUYURAAAGAAAAGAAMGYGCUYCCYUUUWGAGKGUUACCSY uUUKRGRrrAAAAGCAACK
.......(((((((((((((((((((((((((((..(((((((((.(..(((...))).))))))))))))))))))))))))))))))) .))))))............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table