Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
LaRA
CPU time: 963.00
Average sequence ID: 0.763169557125
Average free energy: -1.52346153846
Average covariation: 0.118717948718
Average basepair probability: 0.897942992344
Canonical basepairs: NA

Sequence and structure consensus for LaRA
aAGAAGAUCUCAKGCUGUGACCCUCYAGAGgGuaaGAAGCRCUcUUCUuGUuUGUCUGAAAGAAAAGAAMGYGCUUCCYUUUAuaGAGKG UUACYGcUUUGAGAAAAGCAACRuuua
...................................((.((((............................)))).))............. ...........................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table