Webserver for Aligning structural RNAs

Results

You can download the results in the following formats: fasta clustal stockholm col
MASTR
CPU time: 50.84
Average sequence ID: 0.353115727003
Average free energy: 1.9825
Average covariation: 0.267045454545
Average basepair probability: 0.474701294775
Canonical basepairs: NA

Sequence and structure consensus for MASTR
ggacccccAGgccuMKYUKUWMUCYWUKKCYYUKUMUWCCWMUKSYWGWWYHWAWSMUSUGMWCASWYucaRUMHWKGRRKUACAGAMRK GGCRKWMASAKRRCWSAGMCAGMYYggcaccggcca
....................(........((((.((((((.................................................. )))))).)))))........................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods Tree

Table