Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 2-345 |
| Cow position: | chr11:24336663-24336315 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 3-233 |
| Cow position: | chr11:3252329-3252093 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 196 |
| Conread position: | 3-346 |
| Cow position: | chr11:18887387-18887744 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 98, 273 |
| Conread position: | 6-318 |
| Cow position: | chr11:66438591-66438267 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 111 |
| Conread position: | 6-319 |
| Cow position: | chr11:47759750-47759425 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 276 |
| Conread position: | 6-347 |
| Cow position: | chr11:26548044-26548418 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 6-354 |
| Cow position: | chr11:17546696-17547062 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 215 |
| Conread position: | 6-354 |
| Cow position: | chr11:28108670-28109037 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 8-274 |
| Cow position: | chr11:50027340-50027066 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 111 |
| Conread position: | 8-347 |
| Cow position: | chr11:29232474-29232124 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 126, 84 |
| Conread position: | 9-309 |
| Cow position: | chr11:80473731-80473419 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 9-345 |
| Cow position: | chr11:54484877-54484524 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 11-319 |
| Cow position: | chr11:19101957-19101630 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 11-347 |
| Cow position: | chr11:10847989-10848343 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr11:12357878-12357521 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 201 |
| Conread position: | 11-347 |
| Cow position: | chr11:24393854-24394206 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 11-347 |
| Cow position: | chr11:26124388-26124037 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr11:29668069-29667713 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr11:41170157-41169801 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr11:43514094-43513738 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr11:44156709-44156357 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr11:71330131-71330488 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 14-347 |
| Cow position: | chr11:38834894-38834542 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 14-347 |
| Cow position: | chr11:58134935-58135289 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 17-273 |
| Cow position: | chr11:44582791-44582523 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 17-347 |
| Cow position: | chr11:4269858-4269509 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 17-347 |
| Cow position: | chr11:28054065-28053722 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 20-347 |
| Cow position: | chr11:85393264-85392933 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 23 |
Show alignments to all cow chromosomes.