Cow genome map


           Conread name:
           Emb1-C0005185_L09
        

               Conread position:
               6-272
               

               Cow position:
               chr12:41380501-41380779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 217
               

               Conread position:
               9-233
               

               Cow position:
               chr12:35313849-35313620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 69
               

               Conread position:
               9-320
               

               Cow position:
               chr12:14661805-14661476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 171
               

               Conread position:
               9-347
               

               Cow position:
               chr12:36449401-36449744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               126, 16
               

               Conread position:
               11-343
               

               Cow position:
               chr12:1403319-1403668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               91, 287
               

               Conread position:
               11-345
               

               Cow position:
               chr12:600530-600186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               11-347
               

               Cow position:
               chr12:6405817-6405462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               90, 200
               

               Conread position:
               12-314
               

               Cow position:
               chr12:5369640-5369951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 235
               

               Conread position:
               12-326
               

               Cow position:
               chr12:27513166-27513497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 94
               

               Conread position:
               17-347
               

               Cow position:
               chr12:11099067-11099402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               85, 138
               

               Conread position:
               20-347
               

               Cow position:
               chr12:12292807-12293137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               25-273
               

               Cow position:
               chr12:22204903-22204643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.