Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 2-347 |
| Cow position: | chr13:12633167-12633506 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 4-354 |
| Cow position: | chr13:60466927-60467295 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 6-306 |
| Cow position: | chr13:52646274-52645961 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 6-317 |
| Cow position: | chr13:34424363-34424688 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 205 |
| Conread position: | 6-347 |
| Cow position: | chr13:32545982-32546351 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 6-354 |
| Cow position: | chr13:21696853-21697220 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 6-354 |
| Cow position: | chr13:50110053-50110420 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 8-347 |
| Cow position: | chr13:17331159-17330801 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 94, 89 |
| Conread position: | 9-347 |
| Cow position: | chr13:6667528-6667171 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 69 |
| Conread position: | 9-349 |
| Cow position: | chr13:30278224-30278575 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 11-345 |
| Cow position: | chr13:13900475-13900827 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-345 |
| Cow position: | chr13:35757879-35758242 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-347 |
| Cow position: | chr13:1592545-1592193 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 11-347 |
| Cow position: | chr13:3653713-3653358 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr13:15923773-15923421 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 91, 200 |
| Conread position: | 11-347 |
| Cow position: | chr13:30303890-30304251 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 108 |
| Conread position: | 11-347 |
| Cow position: | chr13:31611700-31611349 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 90, 289 |
| Conread position: | 12-295 |
| Cow position: | chr13:26844636-26844919 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 14-327 |
| Cow position: | chr13:15519897-15519565 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 197 |
| Conread position: | 14-347 |
| Cow position: | chr13:15543151-15543502 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 14-347 |
| Cow position: | chr13:34041724-34041377 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 194 |
| Conread position: | 17-346 |
| Cow position: | chr13:14178225-14177883 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 85, 197 |
| Conread position: | 18-340 |
| Cow position: | chr13:21602330-21602661 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 20-347 |
| Cow position: | chr13:57024314-57024654 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 82, 291 |
| Conread position: | 21-276 |
| Cow position: | chr13:28670646-28670380 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 198 |
| Conread position: | 25-205 |
| Cow position: | chr13:33335695-33335505 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 26-322 |
| Cow position: | chr13:34765832-34765530 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 48-330 |
| Cow position: | chr13:20062655-20062365 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 70-311 |
| Cow position: | chr13:43589997-43590249 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 109-347 |
| Cow position: | chr13:31506342-31506577 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 9 |
Show alignments to all cow chromosomes.