Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-279 |
| Cow position: | chr16:10565626-10565339 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 3-341 |
| Cow position: | chr16:25080938-25081275 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 130, 85 |
| Conread position: | 6-324 |
| Cow position: | chr16:49471797-49472127 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 7 |
| Conread position: | 8-346 |
| Cow position: | chr16:23670834-23671190 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 207 |
| Conread position: | 9-347 |
| Cow position: | chr16:1860360-1860710 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 144 |
| Conread position: | 9-347 |
| Cow position: | chr16:56119818-56120164 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 11-311 |
| Cow position: | chr16:25457323-25457010 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 90, 202 |
| Conread position: | 11-317 |
| Cow position: | chr16:15476981-15477300 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-320 |
| Cow position: | chr16:25441767-25442093 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 90, 293 |
| Conread position: | 11-320 |
| Cow position: | chr16:28470961-28470640 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 290 |
| Conread position: | 11-345 |
| Cow position: | chr16:1567312-1566963 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 11-347 |
| Cow position: | chr16:2482999-2482645 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 330 |
| Conread position: | 11-347 |
| Cow position: | chr16:5484871-5485225 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr16:8815966-8815610 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr16:14665670-14665315 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 90, 216 |
| Conread position: | 11-347 |
| Cow position: | chr16:15185212-15185566 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr16:15493643-15493998 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr16:23535751-23535396 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr16:25342109-25342452 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 209 |
| Conread position: | 11-347 |
| Cow position: | chr16:31591779-31591422 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 220 |
| Conread position: | 12-275 |
| Cow position: | chr16:15526015-15526291 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 12-347 |
| Cow position: | chr16:9209111-9209457 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 151 |
| Conread position: | 17-347 |
| Cow position: | chr16:2410820-2410474 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 84, 138 |
| Conread position: | 17-347 |
| Cow position: | chr16:4478837-4478476 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 299 |
| Conread position: | 18-276 |
| Cow position: | chr16:26651375-26651643 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 23-349 |
| Cow position: | chr16:49279592-49279929 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 186 |
| Conread position: | 27-347 |
| Cow position: | chr16:10438408-10438746 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 184 |
| Conread position: | 61-347 |
| Cow position: | chr16:15567444-15567750 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 95 |
Show alignments to all cow chromosomes.