Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-311 |
| Cow position: | chr18:51239204-51239521 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 3-344 |
| Cow position: | chr18:18496120-18495772 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 3-349 |
| Cow position: | chr18:33142167-33142529 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 99, 114 |
| Conread position: | 6-317 |
| Cow position: | chr18:19353275-19353601 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 6-324 |
| Cow position: | chr18:6061882-6061553 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 9-346 |
| Cow position: | chr18:16869346-16869687 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 129, 40 |
| Conread position: | 11-310 |
| Cow position: | chr18:32653138-32653457 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-317 |
| Cow position: | chr18:27988112-27988442 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 11-331 |
| Cow position: | chr18:16089062-16089396 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 122, 142 |
| Conread position: | 11-347 |
| Cow position: | chr18:14131314-14131669 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr18:23798570-23798922 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr18:27837389-27837034 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 11-347 |
| Cow position: | chr18:28972963-28972612 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 91, 200 |
| Conread position: | 11-347 |
| Cow position: | chr18:36509260-36509618 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 203 |
| Conread position: | 11-347 |
| Cow position: | chr18:52651833-52652185 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 207 |
| Conread position: | 11-349 |
| Cow position: | chr18:14416906-14417257 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 197 |
| Conread position: | 12-199 |
| Cow position: | chr18:16666154-16665962 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 95 |
| Conread position: | 12-343 |
| Cow position: | chr18:17197490-17197140 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 89, 150 |
| Conread position: | 12-347 |
| Cow position: | chr18:35800089-35799751 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 15-346 |
| Cow position: | chr18:51275119-51274772 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 203 |
| Conread position: | 17-339 |
| Cow position: | chr18:25364132-25364467 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 212 |
| Conread position: | 17-347 |
| Cow position: | chr18:16175689-16175343 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 84, 194 |
| Conread position: | 20-347 |
| Cow position: | chr18:29073925-29074263 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 132 |
| Conread position: | 21-354 |
| Cow position: | chr18:36255977-36255643 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 158 |
| Conread position: | 26-340 |
| Cow position: | chr18:30848735-30848403 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 294 |
| Conread position: | 28-347 |
| Cow position: | chr18:38343339-38343017 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 88-345 |
| Cow position: | chr18:44402700-44402974 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 31 |
Show alignments to all cow chromosomes.