Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-330 |
| Cow position: | chr2:38013012-38013351 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 307 |
| Conread position: | 3-346 |
| Cow position: | chr2:47622260-47621904 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 98, 212 |
| Conread position: | 3-347 |
| Cow position: | chr2:33088480-33088838 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 3-347 |
| Cow position: | chr2:46932123-46931763 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 208 |
| Conread position: | 6-354 |
| Cow position: | chr2:2356079-2355712 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 6-354 |
| Cow position: | chr2:2412435-2412068 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 95, 204 |
| Conread position: | 8-216 |
| Cow position: | chr2:5862344-5862132 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 173 |
| Conread position: | 8-332 |
| Cow position: | chr2:64769328-64768994 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 172 |
| Conread position: | 8-347 |
| Cow position: | chr2:10268294-10267943 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 147 |
| Conread position: | 8-347 |
| Cow position: | chr2:22078147-22078509 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 8-347 |
| Cow position: | chr2:24147229-24147584 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 9-231 |
| Cow position: | chr2:73193473-73193698 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 9-266 |
| Cow position: | chr2:36052643-36052382 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 9-347 |
| Cow position: | chr2:1691341-1691690 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 9-347 |
| Cow position: | chr2:5903954-5903600 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 202 |
| Conread position: | 9-347 |
| Cow position: | chr2:6961881-6962238 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 228 |
| Conread position: | 11-249 |
| Cow position: | chr2:45964750-45964501 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 193 |
| Conread position: | 11-345 |
| Cow position: | chr2:28793614-28793966 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 203 |
| Conread position: | 11-347 |
| Cow position: | chr2:282323-281970 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr2:8118908-8119265 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr2:10185858-10185507 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 199 |
| Conread position: | 11-347 |
| Cow position: | chr2:11158752-11158401 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 91, 196 |
| Conread position: | 11-347 |
| Cow position: | chr2:16900619-16900980 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-347 |
| Cow position: | chr2:19011712-19012075 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr2:28649232-28648881 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr2:36980747-36981100 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 90, 199 |
| Conread position: | 11-347 |
| Cow position: | chr2:50077967-50078308 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 11-347 |
| Cow position: | chr2:81257540-81257889 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 11-350 |
| Cow position: | chr2:47811212-47811572 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 90, 73 |
| Conread position: | 12-328 |
| Cow position: | chr2:14777474-14777159 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 183, 89 |
| Conread position: | 12-345 |
| Cow position: | chr2:74857589-74857935 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 199 |
| Conread position: | 14-347 |
| Cow position: | chr2:53330131-53330483 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 88, 197 |
| Conread position: | 16-347 |
| Cow position: | chr2:13045342-13044992 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 85, 195 |
| Conread position: | 17-347 |
| Cow position: | chr2:3789470-3789134 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 259 |
| Conread position: | 20-300 |
| Cow position: | chr2:52352422-52352709 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 20-347 |
| Cow position: | chr2:11686888-11687214 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 148 |
| Conread position: | 20-349 |
| Cow position: | chr2:289402-289059 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 150 |
| Conread position: | 20-349 |
| Cow position: | chr2:5889267-5888923 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 181 |
| Conread position: | 21-347 |
| Cow position: | chr2:16282729-16283059 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 22-314 |
| Cow position: | chr2:14884693-14884986 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 22-347 |
| Cow position: | chr2:64580510-64580177 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 23-324 |
| Cow position: | chr2:24454118-24453808 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 61 |
| Conread position: | 24-347 |
| Cow position: | chr2:2451576-2451908 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 29-347 |
| Cow position: | chr2:42670321-42669984 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 209 |
| Conread position: | 31-343 |
| Cow position: | chr2:31298170-31298508 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.