Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-230 |
| Cow position: | chr3:62733013-62733250 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 151 |
| Conread position: | 3-343 |
| Cow position: | chr3:79431959-79431604 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 133, 149 |
| Conread position: | 6-317 |
| Cow position: | chr3:63915367-63915042 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 6-347 |
| Cow position: | chr3:10240405-10240767 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 6-347 |
| Cow position: | chr3:30618177-30617816 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 6-354 |
| Cow position: | chr3:27919171-27919538 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 205 |
| Conread position: | 6-354 |
| Cow position: | chr3:57753544-57753911 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 8-276 |
| Cow position: | chr3:23289584-23289303 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 8-277 |
| Cow position: | chr3:77424385-77424661 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 210 |
| Conread position: | 8-324 |
| Cow position: | chr3:24445328-24444999 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 9-279 |
| Cow position: | chr3:42447859-42448142 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 9-347 |
| Cow position: | chr3:29579377-29579732 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 93 |
| Conread position: | 9-347 |
| Cow position: | chr3:45975254-45975603 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 261 |
| Conread position: | 9-347 |
| Cow position: | chr3:46503298-46503662 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 9-347 |
| Cow position: | chr3:56339667-56339312 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 10-348 |
| Cow position: | chr3:58165838-58166195 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 11-310 |
| Cow position: | chr3:78026666-78026353 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 11-322 |
| Cow position: | chr3:18541387-18541058 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 11-347 |
| Cow position: | chr3:5884297-5884640 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 226 |
| Conread position: | 11-347 |
| Cow position: | chr3:21181947-21181590 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr3:40824145-40824497 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 11-347 |
| Cow position: | chr3:48058601-48058257 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 123, 95 |
| Conread position: | 11-347 |
| Cow position: | chr3:49544456-49544101 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 11-347 |
| Cow position: | chr3:53516365-53516708 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 11-347 |
| Cow position: | chr3:66620937-66621287 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 123, 217 |
| Conread position: | 11-348 |
| Cow position: | chr3:11541492-11541847 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 12-321 |
| Cow position: | chr3:56397943-56398260 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 90, 185 |
| Conread position: | 14-347 |
| Cow position: | chr3:2710112-2709763 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 204 |
| Conread position: | 17-283 |
| Cow position: | chr3:16899605-16899331 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 177 |
| Conread position: | 19-312 |
| Cow position: | chr3:48229717-48229409 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 20-347 |
| Cow position: | chr3:24643997-24644338 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 164 |
| Conread position: | 20-347 |
| Cow position: | chr3:42994910-42994567 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 82, 196 |
| Conread position: | 26-347 |
| Cow position: | chr3:64357026-64356694 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 172 |
| Conread position: | 49-347 |
| Cow position: | chr3:49136769-49136465 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 56-347 |
| Cow position: | chr3:24458366-24458069 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 182 |
Show alignments to all cow chromosomes.