Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-267 |
| Cow position: | chr6:54179795-54180071 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 5-309 |
| Cow position: | chr6:58027466-58027787 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 8-322 |
| Cow position: | chr6:65882005-65882330 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 8-347 |
| Cow position: | chr6:20560313-20559952 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 9-266 |
| Cow position: | chr6:59918281-59918006 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 9-347 |
| Cow position: | chr6:8202977-8203328 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 294 |
| Conread position: | 11-312 |
| Cow position: | chr6:47042405-47042093 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-345 |
| Cow position: | chr6:8760494-8760146 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-345 |
| Cow position: | chr6:27529208-27528849 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 75, 347 |
| Conread position: | 11-346 |
| Cow position: | chr6:39334073-39333719 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 11-346 |
| Cow position: | chr6:39438561-39438915 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr6:703013-703365 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 90, 290 |
| Conread position: | 11-347 |
| Cow position: | chr6:5948981-5948632 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr6:15279015-15278663 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr6:40553777-40553423 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 12-272 |
| Cow position: | chr6:65941025-65940755 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 213 |
| Conread position: | 12-276 |
| Cow position: | chr6:18973611-18973334 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 204 |
| Conread position: | 12-347 |
| Cow position: | chr6:38271686-38272032 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 268 |
| Conread position: | 14-347 |
| Cow position: | chr6:3487624-3487277 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 203 |
| Conread position: | 14-347 |
| Cow position: | chr6:51086742-51087092 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 197 |
| Conread position: | 14-347 |
| Cow position: | chr6:65842424-65842766 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 219 |
| Conread position: | 17-347 |
| Cow position: | chr6:40866515-40866173 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 84, 147 |
| Conread position: | 25-345 |
| Cow position: | chr6:24239868-24240201 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 26-347 |
| Cow position: | chr6:3276563-3276221 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 31-249 |
| Cow position: | chr6:1099341-1099113 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 44-347 |
| Cow position: | chr6:17046881-17047204 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.