Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 3-267 |
| Cow position: | chr8:45523904-45523634 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 3-272 |
| Cow position: | chr8:21584297-21584577 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 277 |
| Conread position: | 3-274 |
| Cow position: | chr8:46147274-46146991 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 125 |
| Conread position: | 3-345 |
| Cow position: | chr8:42158920-42158567 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 111 |
| Conread position: | 3-347 |
| Cow position: | chr8:11564604-11564957 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 4-354 |
| Cow position: | chr8:13491443-13491801 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 6-320 |
| Cow position: | chr8:50930060-50929724 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 99, 149 |
| Conread position: | 6-349 |
| Cow position: | chr8:38585272-38584917 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 6-354 |
| Cow position: | chr8:1320112-1320475 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 6-354 |
| Cow position: | chr8:61906229-61906597 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 8-276 |
| Cow position: | chr8:47682865-47683146 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 8-347 |
| Cow position: | chr8:39195143-39194789 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 203 |
| Conread position: | 8-347 |
| Cow position: | chr8:42468735-42469092 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 8-347 |
| Cow position: | chr8:42579508-42579157 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 9-320 |
| Cow position: | chr8:42817180-42816861 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 144 |
| Conread position: | 9-347 |
| Cow position: | chr8:5017252-5017609 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 202 |
| Conread position: | 9-347 |
| Cow position: | chr8:11802895-11803251 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 294 |
| Conread position: | 9-347 |
| Cow position: | chr8:41644598-41644244 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 9-354 |
| Cow position: | chr8:2447298-2447650 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 214 |
| Conread position: | 11-279 |
| Cow position: | chr8:44243506-44243227 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 11-320 |
| Cow position: | chr8:38391732-38392036 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 11-347 |
| Cow position: | chr8:17312098-17312458 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr8:19330787-19331142 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr8:23771712-23772070 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 11-347 |
| Cow position: | chr8:25775600-25775243 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 11-347 |
| Cow position: | chr8:32318477-32318123 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr8:33589450-33589807 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-347 |
| Cow position: | chr8:42484991-42485345 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-350 |
| Cow position: | chr8:47661245-47660888 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 12-267 |
| Cow position: | chr8:32815813-32815545 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 12-320 |
| Cow position: | chr8:8315385-8315058 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 291 |
| Conread position: | 12-347 |
| Cow position: | chr8:32647446-32647790 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 13-311 |
| Cow position: | chr8:38606125-38605810 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 17-305 |
| Cow position: | chr8:60061464-60061761 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 194 |
| Conread position: | 17-347 |
| Cow position: | chr8:8401034-8400685 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 17-347 |
| Cow position: | chr8:14590821-14590471 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 18-340 |
| Cow position: | chr8:4687484-4687825 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 83, 193 |
| Conread position: | 18-347 |
| Cow position: | chr8:3785718-3786066 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 186 |
| Conread position: | 20-317 |
| Cow position: | chr8:36919479-36919782 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 20-347 |
| Cow position: | chr8:76500-76166 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 25-347 |
| Cow position: | chr8:10742581-10742239 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 25-347 |
| Cow position: | chr8:14927790-14927454 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 155 |
| Conread position: | 29-305 |
| Cow position: | chr8:12801506-12801798 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 126 |
| Conread position: | 29-347 |
| Cow position: | chr8:50287832-50287499 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 72, 259 |
| Conread position: | 48-347 |
| Cow position: | chr8:44662584-44662274 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 52-349 |
| Cow position: | chr8:11524853-11525149 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 29 |
Show alignments to all cow chromosomes.