Cow genome map
| Conread name: | Emb1-C0005185_L09 |
| Conread position: | 2-347 |
| Cow position: | chr9:50729414-50729058 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 3-347 |
| Cow position: | chr9:9646849-9647202 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 159 |
| Conread position: | 6-320 |
| Cow position: | chr9:3148550-3148225 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 95, 216 |
| Conread position: | 6-344 |
| Cow position: | chr9:28678691-28679049 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 6-354 |
| Cow position: | chr9:28440529-28440896 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 6-354 |
| Cow position: | chr9:51211401-51211768 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 217 |
| Conread position: | 8-343 |
| Cow position: | chr9:59536819-59537171 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 332 |
| Conread position: | 9-320 |
| Cow position: | chr9:39731330-39731013 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 11-317 |
| Cow position: | chr9:10322530-10322848 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 11-324 |
| Cow position: | chr9:17305251-17304926 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 11-347 |
| Cow position: | chr9:6250026-6250379 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 95 |
| Conread position: | 11-347 |
| Cow position: | chr9:7061356-7061003 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 321 |
| Conread position: | 11-347 |
| Cow position: | chr9:18509087-18508742 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 11-347 |
| Cow position: | chr9:37970470-37970127 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 14-347 |
| Cow position: | chr9:29027479-29027131 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 14-347 |
| Cow position: | chr9:59482064-59481716 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 14-347 |
| Cow position: | chr9:60277286-60276938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 88, 286 |
| Conread position: | 17-347 |
| Cow position: | chr9:30673098-30673455 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 17-347 |
| Cow position: | chr9:37162081-37161732 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 17-347 |
| Cow position: | chr9:51181453-51181097 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 18-346 |
| Cow position: | chr9:32296508-32296171 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 133, 83 |
| Conread position: | 20-347 |
| Cow position: | chr9:3543594-3543930 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 20-347 |
| Cow position: | chr9:16176504-16176849 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 22-347 |
| Cow position: | chr9:28655086-28655428 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 193 |
| Conread position: | 26-318 |
| Cow position: | chr9:26102350-26102053 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 192 |
| Conread position: | 26-347 |
| Cow position: | chr9:4533235-4533574 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 48-349 |
| Cow position: | chr9:42310443-42310759 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 170 |
| Conread position: | 49-343 |
| Cow position: | chr9:19009323-19009012 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 49-354 |
| Cow position: | chr9:27035446-27035769 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 162 |
| Conread position: | 53-318 |
| Cow position: | chr9:52292177-52292454 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 93-322 |
| Cow position: | chr9:60970209-60970439 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 187-347 |
| Cow position: | chr9:52033616-52033775 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 86, 13 |
Show alignments to all cow chromosomes.