Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-296 |
| Cow position: | chr11:76375079-76374793 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 274, 117 |
| Conread position: | 1-422 |
| Cow position: | chr11:85394419-85393997 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 202 |
| Conread position: | 4-422 |
| Cow position: | chr11:30125842-30125434 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 5-393 |
| Cow position: | chr11:38836023-38835630 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 202 |
| Conread position: | 5-420 |
| Cow position: | chr11:44861131-44860717 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 5-422 |
| Cow position: | chr11:10846839-10847259 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 5-422 |
| Cow position: | chr11:11987513-11987922 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 5-422 |
| Cow position: | chr11:12359028-12358611 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 242 |
| Conread position: | 5-422 |
| Cow position: | chr11:19103092-19102672 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 139 |
| Conread position: | 5-422 |
| Cow position: | chr11:24392720-24393131 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 94 |
| Conread position: | 5-422 |
| Cow position: | chr11:26125534-26125117 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 195 |
| Conread position: | 5-422 |
| Cow position: | chr11:28055200-28054786 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 200 |
| Conread position: | 5-422 |
| Cow position: | chr11:29669235-29668814 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr11:37492250-37491827 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 87 |
| Conread position: | 5-422 |
| Cow position: | chr11:41171299-41170878 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 202 |
| Conread position: | 5-422 |
| Cow position: | chr11:43515235-43514816 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 5-422 |
| Cow position: | chr11:44157839-44157423 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 239 |
| Conread position: | 5-422 |
| Cow position: | chr11:72110565-72110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 6-418 |
| Cow position: | chr11:25526972-25527370 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 8-173 |
| Cow position: | chr11:31925597-31925765 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 135 |
| Conread position: | 8-392 |
| Cow position: | chr11:4028153-4027770 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 205 |
| Conread position: | 8-422 |
| Cow position: | chr11:44496189-44495784 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 90 |
| Conread position: | 9-422 |
| Cow position: | chr11:15998297-15998707 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 10-421 |
| Cow position: | chr11:17108287-17107873 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 237 |
| Conread position: | 10-422 |
| Cow position: | chr11:10210565-10210148 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 16-422 |
| Cow position: | chr11:4271462-4271057 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 21-261 |
| Cow position: | chr11:17280825-17280593 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 24-339 |
| Cow position: | chr11:77235174-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 227 |
| Conread position: | 50-422 |
| Cow position: | chr11:7113040-7113409 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 103-411 |
| Cow position: | chr11:45110855-45111163 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 144 |
| Conread position: | 146-422 |
| Cow position: | chr11:10089873-10090147 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 55 |
| Conread position: | 176-339 |
| Cow position: | chr11:46962849-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.