Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-197 |
| Cow position: | chr16:29031903-29032100 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 174 |
| Conread position: | 1-422 |
| Cow position: | chr16:2484150-2483733 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 136 |
| Conread position: | 1-422 |
| Cow position: | chr16:25084608-25085031 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 5-214 |
| Cow position: | chr16:19713857-19713646 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 5-293 |
| Cow position: | chr16:7905634-7905924 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 5-388 |
| Cow position: | chr16:29676314-29675934 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 5-420 |
| Cow position: | chr16:25340962-25341373 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 198 |
| Conread position: | 5-420 |
| Cow position: | chr16:27734814-27734395 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 135 |
| Conread position: | 5-421 |
| Cow position: | chr16:6549530-6549115 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 5-422 |
| Cow position: | chr16:408041-407624 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 201 |
| Conread position: | 5-422 |
| Cow position: | chr16:1568459-1568044 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 84 |
| Conread position: | 5-422 |
| Cow position: | chr16:2411979-2411559 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr16:10204424-10204020 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 182 |
| Conread position: | 5-422 |
| Cow position: | chr16:10437248-10437653 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 178 |
| Conread position: | 5-422 |
| Cow position: | chr16:12538934-12538514 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr16:15491698-15492118 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 135 |
| Conread position: | 5-422 |
| Cow position: | chr16:15565741-15566160 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 181 |
| Conread position: | 5-422 |
| Cow position: | chr16:20255316-20254901 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 5-422 |
| Cow position: | chr16:23253512-23253097 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 5-422 |
| Cow position: | chr16:26662741-26663158 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 199 |
| Conread position: | 5-422 |
| Cow position: | chr16:43898278-43897857 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 133 |
| Conread position: | 6-422 |
| Cow position: | chr16:42740425-42740013 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 28 |
| Conread position: | 7-418 |
| Cow position: | chr16:18688132-18687719 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 8-242 |
| Cow position: | chr16:7676700-7676468 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 8-422 |
| Cow position: | chr16:15183800-15184213 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 133 |
| Conread position: | 9-422 |
| Cow position: | chr16:25440616-25441028 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 9-422 |
| Cow position: | chr16:25458473-25458061 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 9-422 |
| Cow position: | chr16:29046015-29046432 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 198 |
| Conread position: | 13-336 |
| Cow position: | chr16:23670593-23670274 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 39-421 |
| Cow position: | chr16:10808190-10808562 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 48-422 |
| Cow position: | chr16:836071-836439 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 103-422 |
| Cow position: | chr16:34529417-34529731 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 141 |
| Conread position: | 106-422 |
| Cow position: | chr16:5483416-5483733 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 128-422 |
| Cow position: | chr16:14666714-14666419 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 77 |
Show alignments to all cow chromosomes.