Cow genome map

Conread name: Emb1-C0005194_P05

Conread position: 1-422
Cow position: chr28:9953858-9954280 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 190

Conread position: 4-422
Cow position: chr28:5812435-5812839 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 200

Conread position: 4-422
Cow position: chr28:8721717-8721300 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 150

Conread position: 5-199
Cow position: chr28:13522454-13522651 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 5-269
Cow position: chr28:1168437-1168174 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 165

Conread position: 5-269
Cow position: chr28:34593570-34593832 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 132

Conread position: 5-421
Cow position: chr28:14705944-14705525 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 201

Conread position: 5-422
Cow position: chr28:782125-782542 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 138

Conread position: 5-422
Cow position: chr28:1815140-1814720 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 90

Conread position: 5-422
Cow position: chr28:7001715-7002137 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 202

Conread position: 5-422
Cow position: chr28:8378293-8378716 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 196

Conread position: 5-422
Cow position: chr28:10582258-10581840 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 123

Conread position: 5-422
Cow position: chr28:13459698-13460117 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 198

Conread position: 5-422
Cow position: chr28:17667785-17667366 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 149

Conread position: 5-422
Cow position: chr28:22261424-22261003 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 198

Conread position: 5-422
Cow position: chr28:26426545-26426130 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 90

Conread position: 6-422
Cow position: chr28:9155556-9155132 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 64

Conread position: 8-312
Cow position: chr28:29819300-29819604 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 195

Conread position: 8-415
Cow position: chr28:5565591-5566003 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 200

Conread position: 9-330
Cow position: chr28:17330792-17330473 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 79

Conread position: 9-422
Cow position: chr28:18520730-18520316 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 238

Conread position: 11-422
Cow position: chr28:17388214-17388629 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 230

Conread position: 16-240
Cow position: chr28:5796557-5796780 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 86

Conread position: 16-422
Cow position: chr28:4381083-4380697 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 114

Conread position: 21-422
Cow position: chr28:7901099-7901502 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 39-422
Cow position: chr28:1504615-1504999 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 148

Conread position: 46-268
Cow position: chr28:5752109-5751884 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 162

Conread position: 49-422
Cow position: chr28:15378221-15377844 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 198

Conread position: 50-418
Cow position: chr28:24652063-24652427 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 197

Conread position: 50-422
Cow position: chr28:3193019-3192644 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 157

Conread position: 51-293
Cow position: chr28:2989909-2989672 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 110

Conread position: 89-422
Cow position: chr28:33252131-33252461 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 115

Conread position: 102-422
Cow position: chr28:12410383-12410076 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 103-422
Cow position: chr28:5114972-5114664 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 97

Conread position: 120-422
Cow position: chr28:7740340-7740633 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 146-421
Cow position: chr28:7790427-7790140 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 56

Show alignments to all cow chromosomes.