Cow genome map

Conread name: Emb1-C0005194_P05

Conread position: 1-339
Cow position: chr3:39326298-39326630 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 104

Conread position: 1-422
Cow position: chr3:3054219-3054629 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 179

Conread position: 1-422
Cow position: chr3:5047577-5047153 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 1-422
Cow position: chr3:5954580-5954155 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 246

Conread position: 3-422
Cow position: chr3:31354644-31354234 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 31

Conread position: 4-419
Cow position: chr3:14634489-14634084 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 97

Conread position: 4-422
Cow position: chr3:3979998-3980421 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 4-422
Cow position: chr3:64358554-64358139 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 82

Conread position: 5-241
Cow position: chr3:49545562-49545328 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 195, 0

Conread position: 5-243
Cow position: chr3:49677373-49677610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 47

Conread position: 5-289
Cow position: chr3:56650654-56650372 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 5-353
Cow position: chr3:47273355-47273033 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 194, 121

Conread position: 5-408
Cow position: chr3:69933008-69933411 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 181

Conread position: 5-420
Cow position: chr3:57485111-57484700 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 11

Conread position: 5-421
Cow position: chr3:42630623-42631044 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 238

Conread position: 5-422
Cow position: chr3:594200-594606 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 103

Conread position: 5-422
Cow position: chr3:2711347-2710930 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 132

Conread position: 5-422
Cow position: chr3:5830018-5829597 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 242

Conread position: 5-422
Cow position: chr3:5883151-5883570 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 202

Conread position: 5-422
Cow position: chr3:9716422-9716845 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 244

Conread position: 5-422
Cow position: chr3:10239263-10239680 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 135

Conread position: 5-422
Cow position: chr3:18542797-18542377 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 198

Conread position: 5-422
Cow position: chr3:18811114-18811534 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 94

Conread position: 5-422
Cow position: chr3:19757349-19756928 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 203

Conread position: 5-422
Cow position: chr3:21183071-21182653 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 199

Conread position: 5-422
Cow position: chr3:23291794-23291376 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 177

Conread position: 5-422
Cow position: chr3:31898361-31897946 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 5-422
Cow position: chr3:34031286-34030868 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 180

Conread position: 5-422
Cow position: chr3:36882301-36881891 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 178

Conread position: 5-422
Cow position: chr3:40822999-40823418 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 198

Conread position: 5-422
Cow position: chr3:42580354-42579936 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 158

Conread position: 5-422
Cow position: chr3:48061211-48060801 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 27

Conread position: 5-422
Cow position: chr3:59860976-59861397 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 202

Conread position: 5-422
Cow position: chr3:64017753-64017333 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 198

Conread position: 5-422
Cow position: chr3:70084032-70083621 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 71

Conread position: 5-422
Cow position: chr3:72629682-72630100 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 199

Conread position: 5-422
Cow position: chr3:78027800-78027379 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 202

Conread position: 6-242
Cow position: chr3:52865133-52864899 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 102, 10

Conread position: 6-422
Cow position: chr3:19943680-19944088 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 8-420
Cow position: chr3:50914919-50915333 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 26

Conread position: 9-422
Cow position: chr3:6685074-6685492 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 187

Conread position: 16-422
Cow position: chr3:48231359-48230980 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-333
Cow position: chr3:17951983-17952304 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 231

Conread position: 20-420
Cow position: chr3:34396433-34396052 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 69

Conread position: 28-293
Cow position: chr3:2909455-2909194 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 20

Conread position: 28-420
Cow position: chr3:75041529-75041139 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 85

Conread position: 30-422
Cow position: chr3:18463940-18463556 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 65

Conread position: 47-410
Cow position: chr3:3806012-3806358 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 66

Conread position: 51-421
Cow position: chr3:66638396-66638770 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 196

Conread position: 76-316
Cow position: chr3:57900895-57901139 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 172

Conread position: 130-422
Cow position: chr3:53515358-53515644 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 11

Conread position: 154-422
Cow position: chr3:19802422-19802690 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 90

Show alignments to all cow chromosomes.