Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-203 |
| Cow position: | chr5:59282268-59282472 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 112, 202 |
| Conread position: | 1-419 |
| Cow position: | chr5:24329803-24330201 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 246 |
| Conread position: | 4-422 |
| Cow position: | chr5:49593950-49593525 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 235 |
| Conread position: | 5-276 |
| Cow position: | chr5:29123286-29123019 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 167 |
| Conread position: | 5-374 |
| Cow position: | chr5:54793108-54792732 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-393 |
| Cow position: | chr5:34696094-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 54 |
| Conread position: | 5-418 |
| Cow position: | chr5:28031003-28031403 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 5-420 |
| Cow position: | chr5:24098157-24098577 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 203 |
| Conread position: | 5-422 |
| Cow position: | chr5:2430622-2430202 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 5-422 |
| Cow position: | chr5:2913960-2914381 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr5:3785321-3785720 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 178 |
| Conread position: | 5-422 |
| Cow position: | chr5:4068500-4068920 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 174 |
| Conread position: | 5-422 |
| Cow position: | chr5:6158684-6158267 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 5-422 |
| Cow position: | chr5:7273376-7273782 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 44 |
| Conread position: | 5-422 |
| Cow position: | chr5:29008871-29009285 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 5-422 |
| Cow position: | chr5:30578832-30579252 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 123 |
| Conread position: | 5-422 |
| Cow position: | chr5:37731855-37732276 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 202 |
| Conread position: | 5-422 |
| Cow position: | chr5:46659238-46659645 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 5-422 |
| Cow position: | chr5:46739075-46738655 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr5:57483037-57482616 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 242 |
| Conread position: | 5-422 |
| Cow position: | chr5:58061313-58060910 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 226, 29 |
| Conread position: | 5-422 |
| Cow position: | chr5:64782507-64782088 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 198 |
| Conread position: | 6-422 |
| Cow position: | chr5:1342285-1341863 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 203 |
| Conread position: | 6-422 |
| Cow position: | chr5:45699791-45700196 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 161 |
| Conread position: | 7-337 |
| Cow position: | chr5:27569668-27569997 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 7-422 |
| Cow position: | chr5:49181793-49182199 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 106 |
| Conread position: | 8-327 |
| Cow position: | chr5:4384742-4385060 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 129 |
| Conread position: | 8-422 |
| Cow position: | chr5:26769333-26769740 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 8-422 |
| Cow position: | chr5:48809201-48808785 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 197 |
| Conread position: | 9-194 |
| Cow position: | chr5:12185174-12185362 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 9-408 |
| Cow position: | chr5:46005871-46005460 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 135 |
| Conread position: | 9-422 |
| Cow position: | chr5:3504733-3504320 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 198 |
| Conread position: | 11-422 |
| Cow position: | chr5:32945396-32945804 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 175 |
| Conread position: | 12-181 |
| Cow position: | chr5:6519412-6519575 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 13-422 |
| Cow position: | chr5:41551407-41550997 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 192 |
| Conread position: | 16-405 |
| Cow position: | chr5:61273647-61273269 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 93 |
| Conread position: | 16-422 |
| Cow position: | chr5:28006739-28007130 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 103-331 |
| Cow position: | chr5:18653618-18653843 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
Show alignments to all cow chromosomes.