Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-287 |
| Cow position: | chr6:6476805-6476519 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 48 |
| Conread position: | 1-422 |
| Cow position: | chr6:11278048-11277623 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 113 |
| Conread position: | 1-422 |
| Cow position: | chr6:38231927-38232349 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 2-242 |
| Cow position: | chr6:12093206-12092971 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-422 |
| Cow position: | chr6:42723271-42722855 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 5-250 |
| Cow position: | chr6:64713200-64713441 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 5-250 |
| Cow position: | chr6:64714767-64715015 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 99, 202 |
| Conread position: | 5-287 |
| Cow position: | chr6:21686547-21686823 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 5-294 |
| Cow position: | chr6:47043780-47043489 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-304 |
| Cow position: | chr6:39437295-39437593 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 199 |
| Conread position: | 5-357 |
| Cow position: | chr6:1823594-1823245 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 11 |
| Conread position: | 5-403 |
| Cow position: | chr6:50497801-50497405 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 5-405 |
| Cow position: | chr6:17045716-17046114 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 130 |
| Conread position: | 5-407 |
| Cow position: | chr6:8201384-8201788 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 201 |
| Conread position: | 5-410 |
| Cow position: | chr6:30275531-30275118 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 206 |
| Conread position: | 5-420 |
| Cow position: | chr6:28274640-28275052 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 87 |
| Conread position: | 5-421 |
| Cow position: | chr6:913284-913713 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 5-421 |
| Cow position: | chr6:3889835-3889408 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 5-422 |
| Cow position: | chr6:701605-702027 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 205 |
| Conread position: | 5-422 |
| Cow position: | chr6:3278299-3277878 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr6:5951585-5951174 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 202 |
| Conread position: | 5-422 |
| Cow position: | chr6:10558989-10558588 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 29 |
| Conread position: | 5-422 |
| Cow position: | chr6:15141523-15141108 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 201 |
| Conread position: | 5-422 |
| Cow position: | chr6:15280891-15280480 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 173 |
| Conread position: | 5-422 |
| Cow position: | chr6:21971325-21971758 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr6:36525694-36526115 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 198 |
| Conread position: | 5-422 |
| Cow position: | chr6:55544675-55544255 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr6:65841241-65841656 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 5-422 |
| Cow position: | chr6:68362663-68362250 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 6-421 |
| Cow position: | chr6:42927033-42927454 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 191 |
| Conread position: | 8-405 |
| Cow position: | chr6:27530344-27529948 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 126 |
| Conread position: | 8-421 |
| Cow position: | chr6:44525098-44524690 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 8-422 |
| Cow position: | chr6:65927595-65928008 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 8 |
| Conread position: | 9-413 |
| Cow position: | chr6:34893354-34892947 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 198 |
| Conread position: | 9-422 |
| Cow position: | chr6:29311151-29311563 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 86 |
| Conread position: | 9-422 |
| Cow position: | chr6:35877061-35876646 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 104 |
| Conread position: | 9-422 |
| Cow position: | chr6:40554929-40554522 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 10-421 |
| Cow position: | chr6:27169233-27169648 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 226 |
| Conread position: | 11-422 |
| Cow position: | chr6:8761643-8761232 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 196 |
| Conread position: | 13-422 |
| Cow position: | chr6:3488742-3488328 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 16-311 |
| Cow position: | chr6:65909089-65909383 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 213 |
| Conread position: | 60-421 |
| Cow position: | chr6:13317777-13317418 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 185 |
| Conread position: | 94-422 |
| Cow position: | chr6:13276543-13276872 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 102-422 |
| Cow position: | chr6:33459615-33459935 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 150 |
Show alignments to all cow chromosomes.