Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-302 |
| Cow position: | chr9:2697358-2697052 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 250 |
| Conread position: | 5-277 |
| Cow position: | chr9:32968322-32968596 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 242 |
| Conread position: | 5-282 |
| Cow position: | chr9:417950-417670 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-294 |
| Cow position: | chr9:1294235-1293944 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 5-336 |
| Cow position: | chr9:26712736-26712414 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 113, 157 |
| Conread position: | 5-392 |
| Cow position: | chr9:7002135-7002524 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 123 |
| Conread position: | 5-398 |
| Cow position: | chr9:6830963-6830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 5-420 |
| Cow position: | chr9:59483088-59482674 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 176 |
| Conread position: | 5-421 |
| Cow position: | chr9:37971626-37971210 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr9:1996339-1995912 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 209 |
| Conread position: | 5-422 |
| Cow position: | chr9:2170639-2171060 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 5-422 |
| Cow position: | chr9:3548589-3548170 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 199 |
| Conread position: | 5-422 |
| Cow position: | chr9:5003594-5004000 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 165 |
| Conread position: | 5-422 |
| Cow position: | chr9:6051459-6051048 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 94 |
| Conread position: | 5-422 |
| Cow position: | chr9:9012689-9013107 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 183 |
| Conread position: | 5-422 |
| Cow position: | chr9:10321403-10321811 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr9:16175349-16175768 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 201 |
| Conread position: | 5-422 |
| Cow position: | chr9:27034289-27034702 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 126 |
| Conread position: | 5-422 |
| Cow position: | chr9:28021128-28021550 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 5-422 |
| Cow position: | chr9:29028648-29028227 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 135 |
| Conread position: | 5-422 |
| Cow position: | chr9:31807121-31807535 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 178 |
| Conread position: | 5-422 |
| Cow position: | chr9:37163227-37162805 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr9:59456018-59455597 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chr9:59535680-59536096 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 80 |
| Conread position: | 5-422 |
| Cow position: | chr9:60278441-60278020 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 242 |
| Conread position: | 6-417 |
| Cow position: | chr9:31020388-31020804 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 7-341 |
| Cow position: | chr9:54360190-54360520 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 8-192 |
| Cow position: | chr9:18510140-18509953 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 8-289 |
| Cow position: | chr9:51183124-51182835 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 156, 245 |
| Conread position: | 8-422 |
| Cow position: | chr9:15072099-15072516 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 240 |
| Conread position: | 8-422 |
| Cow position: | chr9:30671954-30672369 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 129 |
| Conread position: | 9-422 |
| Cow position: | chr9:42309268-42309684 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 161 |
| Conread position: | 10-327 |
| Cow position: | chr9:13219906-13220229 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 11-335 |
| Cow position: | chr9:22650742-22651057 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 117 |
| Conread position: | 16-422 |
| Cow position: | chr9:3155625-3156029 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 50-422 |
| Cow position: | chr9:25023675-25023300 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 156 |
| Conread position: | 103-420 |
| Cow position: | chr9:3542492-3542806 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 101 |
| Conread position: | 143-422 |
| Cow position: | chr9:34992105-34992394 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 58 |
Show alignments to all cow chromosomes.