Cow genome map
| Conread name: | Emb1-C0005194_P05 |
| Conread position: | 1-422 |
| Cow position: | chrX:11668953-11668535 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 112 |
| Conread position: | 2-421 |
| Cow position: | chrX:21633098-21632681 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 2-422 |
| Cow position: | chrX:17668802-17668383 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 244 |
| Conread position: | 2-422 |
| Cow position: | chrX:30179509-30179087 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 204 |
| Conread position: | 4-216 |
| Cow position: | chrX:21586522-21586735 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 5-180 |
| Cow position: | chrX:25187146-25187324 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 5-291 |
| Cow position: | chrX:5834677-5834396 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 5-420 |
| Cow position: | chrX:22777802-22778217 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 107 |
| Conread position: | 5-420 |
| Cow position: | chrX:23392115-23391694 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chrX:18955028-18954615 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 181 |
| Conread position: | 5-422 |
| Cow position: | chrX:21222414-21222835 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 242 |
| Conread position: | 5-422 |
| Cow position: | chrX:21602375-21602786 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 158 |
| Conread position: | 5-422 |
| Cow position: | chrX:22487675-22488088 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 203 |
| Conread position: | 5-422 |
| Cow position: | chrX:23456084-23455671 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 140 |
| Conread position: | 5-422 |
| Cow position: | chrX:24122431-24122013 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 242 |
| Conread position: | 5-422 |
| Cow position: | chrX:26504682-26505091 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 68 |
| Conread position: | 5-422 |
| Cow position: | chrX:26527462-26527883 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chrX:26767706-26767291 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 129 |
| Conread position: | 5-422 |
| Cow position: | chrX:29854077-29853659 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 202 |
| Conread position: | 5-422 |
| Cow position: | chrX:30232617-30232201 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 202 |
| Conread position: | 5-422 |
| Cow position: | chrX:30710841-30711260 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 39 |
| Conread position: | 5-422 |
| Cow position: | chrX:35017314-35017715 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 5-422 |
| Cow position: | chrX:40057575-40057158 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 239 |
| Conread position: | 6-274 |
| Cow position: | chrX:25332582-25332846 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 6-422 |
| Cow position: | chrX:24484920-24484505 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 228 |
| Conread position: | 8-278 |
| Cow position: | chrX:41151717-41151987 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 198 |
| Conread position: | 8-422 |
| Cow position: | chrX:15598419-15598837 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 199 |
| Conread position: | 8-422 |
| Cow position: | chrX:16698791-16699207 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 161 |
| Conread position: | 8-422 |
| Cow position: | chrX:30184398-30183987 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 9-292 |
| Cow position: | chrX:29092995-29093280 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 198 |
| Conread position: | 9-421 |
| Cow position: | chrX:13413625-13413210 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 198 |
| Conread position: | 9-422 |
| Cow position: | chrX:1546425-1546842 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 9-422 |
| Cow position: | chrX:32095468-32095059 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 104 |
| Conread position: | 11-422 |
| Cow position: | chrX:13007141-13006718 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 236 |
| Conread position: | 13-420 |
| Cow position: | chrX:970259-970671 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 195 |
| Conread position: | 13-422 |
| Cow position: | chrX:30142896-30142487 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 192 |
| Conread position: | 19-338 |
| Cow position: | chrX:39717301-39717619 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 94 |
| Conread position: | 47-421 |
| Cow position: | chrX:21794628-21795001 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 189 |
| Conread position: | 50-377 |
| Cow position: | chrX:6276059-6275733 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 106-392 |
| Cow position: | chrX:2537181-2536894 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 138 |
| Conread position: | 167-422 |
| Cow position: | chrX:28603804-28603551 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 210, 77 |
Show alignments to all cow chromosomes.