Cow genome map


           Conread name:
           Emb1-C0005216_N04
        

               Conread position:
               1-672
               

               Cow position:
               chr3:18729294-18728633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               686
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               2-636
               

               Cow position:
               chr3:21305331-21304686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               665
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 53
               

               Conread position:
               3-626
               

               Cow position:
               chr3:17936225-17935577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 161
               

               Conread position:
               97-670
               

               Cow position:
               chr3:12680468-12679903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               388
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               180, 30
               

               Conread position:
               134-670
               

               Cow position:
               chr3:64821588-64822104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 31
               

               Conread position:
               149-597
               

               Cow position:
               chr3:49601943-49601512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               290-642
               

               Cow position:
               chr3:52655555-52655198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 210
               

               Conread position:
               371-604
               

               Cow position:
               chr3:37624529-37624744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               414-650
               

               Cow position:
               chr3:70887016-70887238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               420-672
               

               Cow position:
               chr3:31415412-31415665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.