Cow genome map
| Conread name: | Emb1-C0005218_I18 |
| Conread position: | 1-322 |
| Cow position: | chr1:67287669-67287986 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 58 |
| Conread position: | 1-370 |
| Cow position: | chr1:48246681-48247050 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-371 |
| Cow position: | chr1:3385176-3384812 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-373 |
| Cow position: | chr1:58882934-58882557 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-397 |
| Cow position: | chr1:74285941-74285553 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-447 |
| Cow position: | chr1:6195083-6195530 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-675 |
| Cow position: | chr1:49973339-49972636 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-675 |
| Cow position: | chr1:70419536-70418851 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 1-676 |
| Cow position: | chr1:5502815-5503495 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 66 |
| Conread position: | 1-676 |
| Cow position: | chr1:26518037-26517358 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-676 |
| Cow position: | chr1:72186033-72185349 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-697 |
| Cow position: | chr1:99019163-99018458 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 1-699 |
| Cow position: | chr1:25550810-25551532 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 1-699 |
| Cow position: | chr1:72081615-72082325 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 64 |
| Conread position: | 3-304 |
| Cow position: | chr1:1460346-1460047 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 4-237 |
| Cow position: | chr1:58336689-58336914 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 4-580 |
| Cow position: | chr1:63502680-63503245 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 4-644 |
| Cow position: | chr1:24443479-24442863 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 416 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 109, 56 |
| Conread position: | 4-669 |
| Cow position: | chr1:62805329-62804653 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 4-699 |
| Cow position: | chr1:30534166-30533456 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 4-699 |
| Cow position: | chr1:42737309-42737998 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 10-363 |
| Cow position: | chr1:43570560-43570212 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 78-699 |
| Cow position: | chr1:65387235-65387880 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 103-699 |
| Cow position: | chr1:22619698-22619103 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 333-676 |
| Cow position: | chr1:51965450-51965804 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 408-699 |
| Cow position: | chr1:76620204-76619911 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 73 |
Show alignments to all cow chromosomes.