Cow genome map


           Conread name:
           Emb2-UMC-pd12con-006-a10
        

               Conread position:
               1-171
               

               Cow position:
               chr17:22499224-22499052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr17:22473757-22473940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               6-170
               

               Cow position:
               chr17:22552592-22552426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 124
               

               Conread position:
               6-171
               

               Cow position:
               chr17:22589926-22589761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               156, 161
               

               Conread position:
               6-172
               

               Cow position:
               chr17:22589842-22589678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               9-161
               

               Cow position:
               chr17:22498796-22498644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-171
               

               Cow position:
               chr17:22590254-22590097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               148, 153
               

               Conread position:
               21-171
               

               Cow position:
               chr17:22552157-22552007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               105, 112
               
Show alignments to all cow chromosomes.