Cow genome map
| Conread name: | End1-UMC-pd10en2-001-b01 |
| Conread position: | 1-269 |
| Cow position: | chr3:46084851-46085115 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 210, 90 |
| Conread position: | 3-267 |
| Cow position: | chr3:27689583-27689851 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 105 |
| Conread position: | 3-274 |
| Cow position: | chr3:21652107-21652382 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 62, 66 |
| Conread position: | 4-231 |
| Cow position: | chr3:58103707-58103930 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-237 |
| Cow position: | chr3:19111861-19111632 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 4-286 |
| Cow position: | chr3:23880057-23879784 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 206, 17 |
| Conread position: | 4-286 |
| Cow position: | chr3:43901119-43901391 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 144, 86 |
| Conread position: | 4-286 |
| Cow position: | chr3:54680727-54680447 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 4-286 |
| Cow position: | chr3:56699532-56699252 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 4-286 |
| Cow position: | chr3:65961003-65961281 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 98 |
| Conread position: | 5-237 |
| Cow position: | chr3:10891876-10892112 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 5-264 |
| Cow position: | chr3:30366844-30366581 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 206, 254 |
| Conread position: | 5-277 |
| Cow position: | chr3:37349037-37348764 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 5-281 |
| Cow position: | chr3:57660636-57660908 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 207, 131 |
| Conread position: | 8-163 |
| Cow position: | chr3:84964018-84964173 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 106, 114 |
| Conread position: | 8-283 |
| Cow position: | chr3:322748-322467 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 139, 263 |
| Conread position: | 8-286 |
| Cow position: | chr3:7354701-7354974 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 203, 23 |
| Conread position: | 8-286 |
| Cow position: | chr3:62736560-62736288 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 9-241 |
| Cow position: | chr3:56963318-56963082 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 13 |
| Conread position: | 32-286 |
| Cow position: | chr3:48223924-48223669 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 128, 217 |
| Conread position: | 33-286 |
| Cow position: | chr3:23012349-23012605 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 39-278 |
| Cow position: | chr3:25997948-25997707 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 172, 80 |
| Conread position: | 43-248 |
| Cow position: | chr3:14235206-14234999 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 82-280 |
| Cow position: | chr3:71235716-71235530 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 106-283 |
| Cow position: | chr3:4811284-4811463 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 161 |
Show alignments to all cow chromosomes.