Cow genome map
| Conread name: | End1-UMC-pd10en2-001-b01 |
| Conread position: | 3-256 |
| Cow position: | chr9:5703662-5703902 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 4-270 |
| Cow position: | chr9:50230940-50230672 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 4-271 |
| Cow position: | chr9:56265162-56264889 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 4-278 |
| Cow position: | chr9:46270472-46270201 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 171, 49 |
| Conread position: | 4-280 |
| Cow position: | chr9:6358780-6358501 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 170, 14 |
| Conread position: | 4-280 |
| Cow position: | chr9:50062849-50062574 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 169 |
| Conread position: | 4-280 |
| Cow position: | chr9:61519442-61519717 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 4-281 |
| Cow position: | chr9:48056265-48056526 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 7-286 |
| Cow position: | chr9:40130985-40131278 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 8-280 |
| Cow position: | chr9:29851318-29851601 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 268 |
| Conread position: | 9-281 |
| Cow position: | chr9:27741377-27741644 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 163, 30 |
| Conread position: | 9-281 |
| Cow position: | chr9:29372739-29373005 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 13-260 |
| Cow position: | chr9:23603228-23603478 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 13-286 |
| Cow position: | chr9:34726053-34726322 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 198, 95 |
| Conread position: | 22-152 |
| Cow position: | chr9:4982224-4982354 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 98 |
| Conread position: | 22-286 |
| Cow position: | chr9:26189769-26190029 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 86 |
| Conread position: | 57-207 |
| Cow position: | chr9:55315196-55315048 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 75-273 |
| Cow position: | chr9:7145710-7145510 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 136, 75 |
| Conread position: | 76-258 |
| Cow position: | chr9:55890886-55891073 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.