Cow genome map
| Conread name: | End1-UMC-pd10en2-001-b01 |
| Conread position: | 1-286 |
| Cow position: | chrX:30685070-30684777 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 3-252 |
| Cow position: | chrX:8455551-8455804 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 208, 63 |
| Conread position: | 4-185 |
| Cow position: | chrX:17523232-17523054 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 4-279 |
| Cow position: | chrX:23326806-23326543 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 4-286 |
| Cow position: | chrX:10410092-10409805 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 197 |
| Conread position: | 8-286 |
| Cow position: | chrX:6026697-6026416 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 142 |
| Conread position: | 8-286 |
| Cow position: | chrX:10823094-10822824 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 8-286 |
| Cow position: | chrX:18153475-18153195 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 12 |
| Conread position: | 8-286 |
| Cow position: | chrX:44491431-44491150 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 106, 51 |
| Conread position: | 9-270 |
| Cow position: | chrX:36085908-36086165 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 92 |
| Conread position: | 10-286 |
| Cow position: | chrX:31933895-31933619 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 34 |
| Conread position: | 22-281 |
| Cow position: | chrX:25449872-25450130 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 23-286 |
| Cow position: | chrX:24129327-24129588 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 188, 49 |
| Conread position: | 35-208 |
| Cow position: | chrX:41113908-41114081 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 144 |
| Conread position: | 43-261 |
| Cow position: | chrX:37416557-37416334 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 88-260 |
| Cow position: | chrX:21973022-21973194 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 34 |
Show alignments to all cow chromosomes.