Cow genome map


           Conread name:
           End3-UMC-pd6end2-011-b05
        

               Conread position:
               1-336
               

               Cow position:
               chr21:21027253-21027585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               1-361
               

               Cow position:
               chr21:15304753-15304416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-361
               

               Cow position:
               chr21:22856647-22856989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               194, 79
               

               Conread position:
               1-406
               

               Cow position:
               chr21:10045699-10046091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               2-380
               

               Cow position:
               chr21:25472971-25473333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               90-380
               

               Cow position:
               chr21:21000509-21000218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               90-406
               

               Cow position:
               chr21:38908084-38908397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               96-380
               

               Cow position:
               chr21:28944873-28944574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               96-390
               

               Cow position:
               chr21:27613817-27614101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               96-406
               

               Cow position:
               chr21:4595084-4594772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               97-380
               

               Cow position:
               chr21:1058354-1058639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               127, 9
               
Show alignments to all cow chromosomes.