Cow genome map


           Conread name:
           End3-UMC-pd6end2-011-b05
        

               Conread position:
               1-239
               

               Cow position:
               chr29:17965443-17965674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               1-305
               

               Cow position:
               chr29:27310050-27309758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               193, 49
               

               Conread position:
               1-336
               

               Cow position:
               chr29:8136851-8136523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               1-361
               

               Cow position:
               chr29:43327430-43327770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 79
               

               Conread position:
               1-377
               

               Cow position:
               chr29:16319708-16319352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               196, 34
               

               Conread position:
               1-384
               

               Cow position:
               chr29:23980362-23980730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               121, 79
               

               Conread position:
               1-399
               

               Cow position:
               chr29:38247350-38246965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               97-398
               

               Cow position:
               chr29:2624025-2623728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               102, 73
               

               Conread position:
               97-406
               

               Cow position:
               chr29:43517249-43516921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 147
               
Show alignments to all cow chromosomes.