Cow genome map


           Conread name:
           End3-UMC-pd6end2-011-b05
        

               Conread position:
               1-222
               

               Cow position:
               chr6:25178732-25178518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               1-295
               

               Cow position:
               chr6:37644011-37644287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               118, 49
               

               Conread position:
               2-380
               

               Cow position:
               chr6:3118794-3118427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               118, 48
               

               Conread position:
               2-380
               

               Cow position:
               chr6:51191222-51191597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               153, 48
               

               Conread position:
               3-337
               

               Cow position:
               chr6:27365762-27366088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               45-379
               

               Cow position:
               chr6:2582248-2582570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 6
               

               Conread position:
               96-380
               

               Cow position:
               chr6:47640972-47640689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               100-380
               

               Cow position:
               chr6:45065499-45065224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               102-383
               

               Cow position:
               chr6:66550242-66550525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               158-379
               

               Cow position:
               chr6:49685150-49685366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 12
               
Show alignments to all cow chromosomes.