Cow genome map


           Conread name:
           End3-UMC-pd6end2-011-b05
        

               Conread position:
               1-336
               

               Cow position:
               chr8:8481507-8481186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               1-337
               

               Cow position:
               chr8:32827960-32828282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               2-296
               

               Cow position:
               chr8:27368508-27368793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               2-349
               

               Cow position:
               chr8:53943437-53943107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               253, 48
               

               Conread position:
               3-361
               

               Cow position:
               chr8:35988895-35989243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               12-381
               

               Cow position:
               chr8:13559138-13559494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 28
               

               Conread position:
               92-381
               

               Cow position:
               chr8:34397729-34398017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               94-386
               

               Cow position:
               chr8:4784861-4784569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               101-376
               

               Cow position:
               chr8:20080588-20080317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               119-387
               

               Cow position:
               chr8:15871289-15871022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 44
               
Show alignments to all cow chromosomes.