Cow genome map


           Conread name:
           Fet1-UMC-pd20fet-003-d09
        

               Conread position:
               14-268
               

               Cow position:
               chr3:10585344-10585086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               14-271
               

               Cow position:
               chr3:26717530-26717265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               278-394
               

               Cow position:
               chr3:83504285-83504402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               281-394
               

               Cow position:
               chr3:7428089-7428202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               284-390
               

               Cow position:
               chr3:507555-507659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               284-391
               

               Cow position:
               chr3:62623098-62622990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               285-381
               

               Cow position:
               chr3:74243087-74243183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               285-394
               

               Cow position:
               chr3:47726071-47725964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               288-394
               

               Cow position:
               chr3:31048416-31048310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-394
               

               Cow position:
               chr3:58940241-58940330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.