Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 254-711 |
| Cow position: | chr1:76748875-76748397 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 147 |
| Conread position: | 258-711 |
| Cow position: | chr1:2600175-2599709 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 259-704 |
| Cow position: | chr1:53650179-53650637 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 259-711 |
| Cow position: | chr1:28876626-28877093 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 259-711 |
| Cow position: | chr1:40603558-40604023 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 259-711 |
| Cow position: | chr1:52171312-52170847 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 259-721 |
| Cow position: | chr1:56619416-56618949 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 299 |
| Conread position: | 260-711 |
| Cow position: | chr1:4337287-4337754 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 260-711 |
| Cow position: | chr1:30531502-30531037 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 409 |
| Conread position: | 261-705 |
| Cow position: | chr1:61006291-61005831 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 301 |
| Conread position: | 261-708 |
| Cow position: | chr1:73443341-73442886 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 261-710 |
| Cow position: | chr1:85776930-85776465 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 202 |
| Conread position: | 261-711 |
| Cow position: | chr1:10071576-10071110 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 196 |
| Conread position: | 261-711 |
| Cow position: | chr1:14240535-14240069 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 262 |
| Conread position: | 261-711 |
| Cow position: | chr1:32563007-32562541 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 261-711 |
| Cow position: | chr1:52355141-52354678 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 261-711 |
| Cow position: | chr1:52508091-52507625 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 298 |
| Conread position: | 261-711 |
| Cow position: | chr1:65390089-65390559 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 261-722 |
| Cow position: | chr1:68783377-68782910 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 53 |
| Conread position: | 262-703 |
| Cow position: | chr1:81779205-81779661 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 262-705 |
| Cow position: | chr1:90605304-90604853 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 21 |
| Conread position: | 262-705 |
| Cow position: | chr1:97205891-97206345 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 262-711 |
| Cow position: | chr1:17938216-17937755 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 267-728 |
| Cow position: | chr1:70380874-70380401 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 218 |
| Conread position: | 268-706 |
| Cow position: | chr1:94879541-94879091 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 287 |
| Conread position: | 268-711 |
| Cow position: | chr1:82091435-82091889 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 269-711 |
| Cow position: | chr1:76020400-76019943 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 295 |
| Conread position: | 269-718 |
| Cow position: | chr1:64251785-64251320 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 42 |
| Conread position: | 270-705 |
| Cow position: | chr1:67009447-67008998 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 270-726 |
| Cow position: | chr1:54116785-54117240 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 37 |
| Conread position: | 279-711 |
| Cow position: | chr1:39100328-39100776 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 280-711 |
| Cow position: | chr1:62711638-62711192 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 283-748 |
| Cow position: | chr1:98612501-98612984 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 287-704 |
| Cow position: | chr1:24446432-24445996 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 287-711 |
| Cow position: | chr1:56720942-56720503 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 270 |
| Conread position: | 287-724 |
| Cow position: | chr1:23932300-23931843 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 289-711 |
| Cow position: | chr1:90393196-90392761 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 290-705 |
| Cow position: | chr1:64717330-64716904 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 290-710 |
| Cow position: | chr1:8828582-8829019 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 267 |
| Conread position: | 297-722 |
| Cow position: | chr1:61591469-61591031 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 134 |
| Conread position: | 299-726 |
| Cow position: | chr1:99105579-99105135 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 259 |
| Conread position: | 323-706 |
| Cow position: | chr1:76223353-76222959 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 49 |
| Conread position: | 324-703 |
| Cow position: | chr1:95500158-95499766 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 333-703 |
| Cow position: | chr1:53312754-53313138 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 333-711 |
| Cow position: | chr1:3382307-3381917 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 333-711 |
| Cow position: | chr1:13438897-13439285 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 103, 214 |
| Conread position: | 351-705 |
| Cow position: | chr1:57576403-57576031 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 359-711 |
| Cow position: | chr1:23670163-23669795 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 366-711 |
| Cow position: | chr1:53397365-53397721 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 374-711 |
| Cow position: | chr1:74283678-74283327 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 374-711 |
| Cow position: | chr1:85163447-85163095 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 378-721 |
| Cow position: | chr1:43353260-43352901 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 179 |
| Conread position: | 395-711 |
| Cow position: | chr1:31646762-31646432 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 440-711 |
| Cow position: | chr1:77553478-77553195 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 442-711 |
| Cow position: | chr1:44962731-44962453 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 455-711 |
| Cow position: | chr1:61747690-61747423 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 462-722 |
| Cow position: | chr1:41004887-41004620 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 90 |
| Conread position: | 463-703 |
| Cow position: | chr1:40479873-40479632 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 463-705 |
| Cow position: | chr1:84169981-84170233 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 469-705 |
| Cow position: | chr1:3963106-3963350 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 470-704 |
| Cow position: | chr1:55163412-55163655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 82 |
| Conread position: | 473-694 |
| Cow position: | chr1:77168467-77168693 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 478-705 |
| Cow position: | chr1:19442332-19442570 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 482-711 |
| Cow position: | chr1:89510657-89510418 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 485-706 |
| Cow position: | chr1:24595325-24595549 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 485-711 |
| Cow position: | chr1:44136944-44136714 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 488-711 |
| Cow position: | chr1:22221353-22221121 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 488-711 |
| Cow position: | chr1:42740787-42741020 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 527-706 |
| Cow position: | chr1:61735899-61735710 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 25 |
Show alignments to all cow chromosomes.