Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 259-703 |
| Cow position: | chr16:5726197-5726652 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 259-705 |
| Cow position: | chr16:31122990-31122526 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 259-711 |
| Cow position: | chr16:7467401-7467872 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 250 |
| Conread position: | 261-707 |
| Cow position: | chr16:6379843-6379383 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 258 |
| Conread position: | 261-711 |
| Cow position: | chr16:10203138-10202674 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 408 |
| Conread position: | 261-711 |
| Cow position: | chr16:10441034-10441501 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 298 |
| Conread position: | 261-711 |
| Cow position: | chr16:23249159-23248702 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 261-711 |
| Cow position: | chr16:23533204-23532739 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 409 |
| Conread position: | 261-711 |
| Cow position: | chr16:23986109-23986564 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 301 |
| Conread position: | 261-745 |
| Cow position: | chr16:19409559-19409060 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 227 |
| Conread position: | 262-711 |
| Cow position: | chr16:28468322-28467861 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 268-704 |
| Cow position: | chr16:41753304-41752859 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 11 |
| Conread position: | 269-711 |
| Cow position: | chr16:11640679-11641135 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 269-738 |
| Cow position: | chr16:11007517-11008019 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 270-712 |
| Cow position: | chr16:48341401-48340958 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 166, 38 |
| Conread position: | 279-710 |
| Cow position: | chr16:3820451-3820893 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 30 |
| Conread position: | 285-711 |
| Cow position: | chr16:34809190-34809631 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 274 |
| Conread position: | 287-706 |
| Cow position: | chr16:15904398-15903965 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 270 |
| Conread position: | 287-711 |
| Cow position: | chr16:3148216-3147780 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 32 |
| Conread position: | 287-711 |
| Cow position: | chr16:4080368-4080812 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 287-711 |
| Cow position: | chr16:19062658-19063097 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 94 |
| Conread position: | 287-711 |
| Cow position: | chr16:46555245-46555684 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 270 |
| Conread position: | 287-711 |
| Cow position: | chr16:52527054-52527490 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 296-711 |
| Cow position: | chr16:22825344-22824920 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 101 |
| Conread position: | 305-711 |
| Cow position: | chr16:9736506-9736100 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 293, 133 |
| Conread position: | 318-705 |
| Cow position: | chr16:49450009-49449622 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 105 |
| Conread position: | 325-711 |
| Cow position: | chr16:8620591-8620980 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 325-747 |
| Cow position: | chr16:237563-238012 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 70, 197 |
| Conread position: | 341-711 |
| Cow position: | chr16:49768872-49768487 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 95, 224 |
| Conread position: | 351-694 |
| Cow position: | chr16:15442974-15443316 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 353-718 |
| Cow position: | chr16:23991128-23990751 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 98 |
| Conread position: | 356-711 |
| Cow position: | chr16:14351565-14351197 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 80, 190 |
| Conread position: | 356-711 |
| Cow position: | chr16:45732014-45731642 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 33, 205 |
| Conread position: | 367-711 |
| Cow position: | chr16:54179553-54179195 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 195 |
| Conread position: | 369-711 |
| Cow position: | chr16:24426876-24427233 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 188 |
| Conread position: | 458-714 |
| Cow position: | chr16:40561693-40561960 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 94 |
| Conread position: | 469-706 |
| Cow position: | chr16:14236746-14236992 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 470-711 |
| Cow position: | chr16:15477660-15477910 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 480-711 |
| Cow position: | chr16:22320238-22319996 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 482-711 |
| Cow position: | chr16:5654007-5654246 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 485-711 |
| Cow position: | chr16:24228855-24228620 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 486-711 |
| Cow position: | chr16:51710625-51710398 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 66 |
Show alignments to all cow chromosomes.