Cow genome map


           Conread name:
           Liv1-LVRM10074H11
        

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 19
               

               Conread position:
               259-711
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 16
               

               Conread position:
               259-711
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 415
               

               Conread position:
               259-722
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 298
               

               Conread position:
               261-704
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 220
               

               Conread position:
               261-705
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               261-710
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               261-711
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               261-711
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               261-716
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               262-728
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 11
               

               Conread position:
               264-750
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               266-710
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 76
               

               Conread position:
               268-749
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               324
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               165, 143
               

               Conread position:
               269-711
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 300
               

               Conread position:
               270-711
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 126
               

               Conread position:
               270-726
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 124
               

               Conread position:
               285-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 383
               

               Conread position:
               287-702
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               287-704
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               148, 38
               

               Conread position:
               287-706
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 66
               

               Conread position:
               287-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 70
               

               Conread position:
               287-711
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               287-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 383
               

               Conread position:
               288-703
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               288-705
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               148, 235
               

               Conread position:
               288-710
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 384
               

               Conread position:
               288-711
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               289-711
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 230
               

               Conread position:
               290-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               112, 91
               

               Conread position:
               293-714
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 269
               

               Conread position:
               297-705
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               290
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               139, 193
               

               Conread position:
               299-711
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               307-705
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 139
               

               Conread position:
               307-706
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               309-704
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               133, 54
               

               Conread position:
               314-705
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 241
               

               Conread position:
               321-711
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 237
               

               Conread position:
               329-710
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               107, 218
               

               Conread position:
               333-711
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               352-711
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               94, 77
               

               Conread position:
               362-704
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               366-711
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               5, 192
               

               Conread position:
               367-712
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               413-711
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               446-711
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 223
               

               Conread position:
               446-750
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               455-706
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               455-725
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               458-716
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 95
               

               Conread position:
               462-711
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 65
               

               Conread position:
               464-740
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               469-705
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               480-711
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               481-711
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               481-720
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 71
               

               Conread position:
               482-704
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 70
               

               Conread position:
               485-711
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               488-711
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               490-734
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               505-705
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 47
               
Show alignments to all cow chromosomes.