Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 1-206 |
| Cow position: | chr2:50982439-50982646 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 259-711 |
| Cow position: | chr2:9591206-9591670 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 16 |
| Conread position: | 259-711 |
| Cow position: | chr2:80288729-80288258 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 415 |
| Conread position: | 259-722 |
| Cow position: | chr2:32409237-32408770 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 298 |
| Conread position: | 261-704 |
| Cow position: | chr2:59397787-59397335 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 220 |
| Conread position: | 261-705 |
| Cow position: | chr2:57557665-57557206 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 261-710 |
| Cow position: | chr2:8121727-8122185 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 261-711 |
| Cow position: | chr2:44094394-44094856 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 261-711 |
| Cow position: | chr2:50080594-50081058 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 261-716 |
| Cow position: | chr2:32417604-32417134 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 262-728 |
| Cow position: | chr2:36879015-36878537 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 264-750 |
| Cow position: | chr2:26878670-26879169 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 266-710 |
| Cow position: | chr2:19212770-19212313 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 268-749 |
| Cow position: | chr2:60937261-60937758 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 165, 143 |
| Conread position: | 269-711 |
| Cow position: | chr2:16415156-16415624 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 300 |
| Conread position: | 270-711 |
| Cow position: | chr2:27179409-27179864 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 126 |
| Conread position: | 270-726 |
| Cow position: | chr2:41451499-41451973 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 124 |
| Conread position: | 285-711 |
| Cow position: | chr2:70524810-70525249 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 383 |
| Conread position: | 287-702 |
| Cow position: | chr2:56054797-56055226 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 287-704 |
| Cow position: | chr2:24270522-24270948 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 148, 38 |
| Conread position: | 287-706 |
| Cow position: | chr2:2181218-2180787 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 66 |
| Conread position: | 287-711 |
| Cow position: | chr2:11152925-11152496 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 70 |
| Conread position: | 287-711 |
| Cow position: | chr2:12595994-12596433 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 287-711 |
| Cow position: | chr2:65935154-65934715 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 383 |
| Conread position: | 288-703 |
| Cow position: | chr2:86532567-86532997 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 288-705 |
| Cow position: | chr2:53533504-53533082 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 148, 235 |
| Conread position: | 288-710 |
| Cow position: | chr2:17808291-17808730 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 384 |
| Conread position: | 288-711 |
| Cow position: | chr2:16717846-16717414 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 289-711 |
| Cow position: | chr2:1186798-1186362 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 230 |
| Conread position: | 290-711 |
| Cow position: | chr2:37008714-37009149 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 112, 91 |
| Conread position: | 293-714 |
| Cow position: | chr2:15488814-15488373 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 269 |
| Conread position: | 297-705 |
| Cow position: | chr2:6539938-6539512 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 139, 193 |
| Conread position: | 299-711 |
| Cow position: | chr2:43978601-43978170 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 307-705 |
| Cow position: | chr2:10744155-10743749 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 139 |
| Conread position: | 307-706 |
| Cow position: | chr2:47768312-47768722 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 42 |
| Conread position: | 309-704 |
| Cow position: | chr2:42361306-42361714 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 133, 54 |
| Conread position: | 314-705 |
| Cow position: | chr2:82268004-82267604 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 122, 241 |
| Conread position: | 321-711 |
| Cow position: | chr2:43473512-43473921 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 237 |
| Conread position: | 329-710 |
| Cow position: | chr2:549981-549589 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 107, 218 |
| Conread position: | 333-711 |
| Cow position: | chr2:32113631-32113241 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 352-711 |
| Cow position: | chr2:31265147-31264773 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 362-704 |
| Cow position: | chr2:2672896-2673249 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 366-711 |
| Cow position: | chr2:7506250-7505889 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 192 |
| Conread position: | 367-712 |
| Cow position: | chr2:36397305-36397662 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 413-711 |
| Cow position: | chr2:65604509-65604196 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 144 |
| Conread position: | 446-711 |
| Cow position: | chr2:53659065-53658786 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 223 |
| Conread position: | 446-750 |
| Cow position: | chr2:61974237-61974549 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 455-706 |
| Cow position: | chr2:84996780-84997042 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 455-725 |
| Cow position: | chr2:24470462-24470194 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 458-716 |
| Cow position: | chr2:1421854-1422116 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 462-711 |
| Cow position: | chr2:36056324-36056066 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 65 |
| Conread position: | 464-740 |
| Cow position: | chr2:58321318-58321024 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 469-705 |
| Cow position: | chr2:24540072-24540317 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 480-711 |
| Cow position: | chr2:39385367-39385132 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 481-711 |
| Cow position: | chr2:1365403-1365163 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 481-720 |
| Cow position: | chr2:27358536-27358781 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 482-704 |
| Cow position: | chr2:42226778-42226546 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 485-711 |
| Cow position: | chr2:46311948-46312182 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 488-711 |
| Cow position: | chr2:71800592-71800360 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 490-734 |
| Cow position: | chr2:1202645-1202900 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 505-705 |
| Cow position: | chr2:19748926-19749134 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 47 |
Show alignments to all cow chromosomes.