Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 3-198 |
| Cow position: | chr5:23686686-23686885 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 259-704 |
| Cow position: | chr5:59082902-59082443 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 259-709 |
| Cow position: | chr5:29968919-29969387 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 301 |
| Conread position: | 259-711 |
| Cow position: | chr5:32755139-32754656 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 259-711 |
| Cow position: | chr5:62436435-62436904 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 14 |
| Conread position: | 259-716 |
| Cow position: | chr5:6670867-6670396 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 268 |
| Conread position: | 261-704 |
| Cow position: | chr5:37377171-37377617 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 261-711 |
| Cow position: | chr5:42671716-42671272 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 262-711 |
| Cow position: | chr5:48026588-48027048 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 262-711 |
| Cow position: | chr5:64778681-64778225 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 21 |
| Conread position: | 266-704 |
| Cow position: | chr5:53834980-53835443 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 302 |
| Conread position: | 267-711 |
| Cow position: | chr5:42668093-42667636 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 268-742 |
| Cow position: | chr5:21828154-21828644 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 289 |
| Conread position: | 270-707 |
| Cow position: | chr5:34669770-34669318 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 287-706 |
| Cow position: | chr5:5106565-5106998 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 124 |
| Conread position: | 287-706 |
| Cow position: | chr5:31709642-31710067 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 287-711 |
| Cow position: | chr5:34709111-34709548 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 381 |
| Conread position: | 287-712 |
| Cow position: | chr5:29255872-29255432 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 270 |
| Conread position: | 287-712 |
| Cow position: | chr5:57935777-57935356 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 90 |
| Conread position: | 293-705 |
| Cow position: | chr5:15722966-15722545 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 170, 62 |
| Conread position: | 294-711 |
| Cow position: | chr5:55684449-55684884 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 305-721 |
| Cow position: | chr5:65312311-65312737 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 315-705 |
| Cow position: | chr5:57584361-57584773 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 148 |
| Conread position: | 315-711 |
| Cow position: | chr5:3581923-3582335 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 132, 95 |
| Conread position: | 326-711 |
| Cow position: | chr5:9001982-9001591 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 110, 231 |
| Conread position: | 353-705 |
| Cow position: | chr5:28247560-28247926 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 72, 204 |
| Conread position: | 353-711 |
| Cow position: | chr5:41976440-41976089 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 358-705 |
| Cow position: | chr5:29904129-29903772 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 367-711 |
| Cow position: | chr5:23745382-23745025 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 70, 190 |
| Conread position: | 377-706 |
| Cow position: | chr5:41331768-41332111 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 180 |
| Conread position: | 387-720 |
| Cow position: | chr5:18573581-18573934 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 347 |
| Conread position: | 430-721 |
| Cow position: | chr5:52165715-52165413 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 435-709 |
| Cow position: | chr5:32140610-32140324 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 439-705 |
| Cow position: | chr5:54405423-54405144 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 446-711 |
| Cow position: | chr5:34506447-34506170 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 455-711 |
| Cow position: | chr5:26378178-26377908 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 457-712 |
| Cow position: | chr5:45846200-45845936 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 96 |
| Conread position: | 461-711 |
| Cow position: | chr5:27690570-27690307 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 91 |
| Conread position: | 468-711 |
| Cow position: | chr5:18287170-18287422 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 84 |
| Conread position: | 473-704 |
| Cow position: | chr5:64524373-64524130 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 487-705 |
| Cow position: | chr5:50443147-50442917 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 497-718 |
| Cow position: | chr5:47082680-47082915 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 58 |
Show alignments to all cow chromosomes.