Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 22-214 |
| Cow position: | chr6:15921180-15920985 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 39-711 |
| Cow position: | chr6:48324-47635 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 451 |
| Conread position: | 259-711 |
| Cow position: | chr6:16737325-16737791 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 297 |
| Conread position: | 259-711 |
| Cow position: | chr6:28112387-28111918 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 259-711 |
| Cow position: | chr6:39331082-39330612 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 259-711 |
| Cow position: | chr6:41192798-41193270 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 416 |
| Conread position: | 259-711 |
| Cow position: | chr6:45666483-45666020 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 259-716 |
| Cow position: | chr6:42564993-42565460 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 34 |
| Conread position: | 260-711 |
| Cow position: | chr6:16699587-16700032 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 261-702 |
| Cow position: | chr6:47574243-47574690 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 90 |
| Conread position: | 261-712 |
| Cow position: | chr6:55903542-55904004 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 265 |
| Conread position: | 261-718 |
| Cow position: | chr6:46283651-46283186 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 298 |
| Conread position: | 262-702 |
| Cow position: | chr6:47977392-47977841 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 262-711 |
| Cow position: | chr6:3886046-3885586 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 21 |
| Conread position: | 262-711 |
| Cow position: | chr6:47039752-47039303 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 264-711 |
| Cow position: | chr6:65921298-65920839 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 283 |
| Conread position: | 264-711 |
| Cow position: | chr6:65930683-65931141 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 23 |
| Conread position: | 273-711 |
| Cow position: | chr6:6182262-6181806 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 273-711 |
| Cow position: | chr6:7175188-7174739 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 40 |
| Conread position: | 277-705 |
| Cow position: | chr6:27887398-27887821 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 159, 34 |
| Conread position: | 279-711 |
| Cow position: | chr6:49444588-49445038 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 220 |
| Conread position: | 283-711 |
| Cow position: | chr6:40550225-40549781 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 284-703 |
| Cow position: | chr6:6721449-6721882 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 287-706 |
| Cow position: | chr6:51869418-51869849 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 270 |
| Conread position: | 287-711 |
| Cow position: | chr6:44146468-44146029 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 288-711 |
| Cow position: | chr6:25790235-25789817 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 148, 52 |
| Conread position: | 289-711 |
| Cow position: | chr6:49442448-49442860 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 294-750 |
| Cow position: | chr6:55141346-55140869 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 253 |
| Conread position: | 297-704 |
| Cow position: | chr6:50120442-50120022 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 263 |
| Conread position: | 303-704 |
| Cow position: | chr6:26914452-26914861 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 131 |
| Conread position: | 305-711 |
| Cow position: | chr6:14064289-14063888 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 254, 87 |
| Conread position: | 316-716 |
| Cow position: | chr6:32427633-32428025 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 243, 120 |
| Conread position: | 318-712 |
| Cow position: | chr6:42131464-42131050 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 129, 238 |
| Conread position: | 326-718 |
| Cow position: | chr6:10332738-10332330 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 279 |
| Conread position: | 336-705 |
| Cow position: | chr6:4865153-4864774 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 352-712 |
| Cow position: | chr6:21590123-21590489 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 305 |
| Conread position: | 354-711 |
| Cow position: | chr6:27870158-27870530 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 366-718 |
| Cow position: | chr6:2012439-2012795 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 372-711 |
| Cow position: | chr6:55143701-55143354 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 377-711 |
| Cow position: | chr6:46465255-46465598 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 413-705 |
| Cow position: | chr6:19809139-19809443 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 442-711 |
| Cow position: | chr6:3719474-3719754 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 446-748 |
| Cow position: | chr6:30315633-30315315 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 307 |
| Conread position: | 456-705 |
| Cow position: | chr6:33865589-33865326 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 458-705 |
| Cow position: | chr6:60516235-60516492 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 478-704 |
| Cow position: | chr6:44098615-44098851 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 485-711 |
| Cow position: | chr6:1770659-1770425 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 42 |
Show alignments to all cow chromosomes.