Cow genome map
| Conread name: | Liv1-LVRM10074H11 |
| Conread position: | 18-206 |
| Cow position: | chrX:21643737-21643930 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 252-711 |
| Cow position: | chrX:6543546-6544013 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 259-710 |
| Cow position: | chrX:2524433-2523974 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 177, 107 |
| Conread position: | 259-711 |
| Cow position: | chrX:13057842-13058321 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 305 |
| Conread position: | 259-711 |
| Cow position: | chrX:22887949-22888415 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 259-711 |
| Cow position: | chrX:23572527-23572043 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 21, 292 |
| Conread position: | 261-709 |
| Cow position: | chrX:30180636-30180171 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 411 |
| Conread position: | 261-711 |
| Cow position: | chrX:18244272-18244746 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 261-711 |
| Cow position: | chrX:23969645-23970115 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 261-711 |
| Cow position: | chrX:25459347-25458880 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 261-711 |
| Cow position: | chrX:40224951-40224486 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 261-738 |
| Cow position: | chrX:2185533-2186011 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 18 |
| Conread position: | 262-711 |
| Cow position: | chrX:16702967-16703427 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 268-748 |
| Cow position: | chrX:24309808-24309328 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 11 |
| Conread position: | 269-703 |
| Cow position: | chrX:21592591-21593035 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 94 |
| Conread position: | 269-705 |
| Cow position: | chrX:31488816-31489263 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 270-705 |
| Cow position: | chrX:29049280-29049726 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 160 |
| Conread position: | 280-728 |
| Cow position: | chrX:35680656-35681108 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 52 |
| Conread position: | 287-705 |
| Cow position: | chrX:14908330-14908767 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 287-711 |
| Cow position: | chrX:7551483-7551038 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 287-711 |
| Cow position: | chrX:22811208-22811643 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 56 |
| Conread position: | 287-711 |
| Cow position: | chrX:38151006-38151445 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 270 |
| Conread position: | 287-713 |
| Cow position: | chrX:2932402-2931963 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 270 |
| Conread position: | 288-703 |
| Cow position: | chrX:13786063-13785629 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 70 |
| Conread position: | 288-711 |
| Cow position: | chrX:4326170-4325740 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 288-711 |
| Cow position: | chrX:16711275-16711711 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 84 |
| Conread position: | 289-711 |
| Cow position: | chrX:14162512-14162948 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 293-711 |
| Cow position: | chrX:28646658-28646228 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 151, 269 |
| Conread position: | 294-634 |
| Cow position: | chrX:28080116-28080456 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 176, 63 |
| Conread position: | 304-711 |
| Cow position: | chrX:41122407-41122829 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 67 |
| Conread position: | 310-688 |
| Cow position: | chrX:18711876-18712272 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 315-748 |
| Cow position: | chrX:33493076-33493526 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 244 |
| Conread position: | 331-711 |
| Cow position: | chrX:22538592-22538197 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 334-705 |
| Cow position: | chrX:32871421-32871035 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 223 |
| Conread position: | 334-718 |
| Cow position: | chrX:25575324-25575725 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 223 |
| Conread position: | 346-704 |
| Cow position: | chrX:28866604-28866239 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 352-711 |
| Cow position: | chrX:8782127-8782501 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 85, 205 |
| Conread position: | 366-711 |
| Cow position: | chrX:14408053-14407693 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 304 |
| Conread position: | 368-711 |
| Cow position: | chrX:15120486-15120132 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 374-711 |
| Cow position: | chrX:20582437-20582787 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 151 |
| Conread position: | 378-718 |
| Cow position: | chrX:38438897-38439236 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 139 |
| Conread position: | 378-722 |
| Cow position: | chrX:17200196-17200570 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 68, 366 |
| Conread position: | 381-705 |
| Cow position: | chrX:14884550-14884213 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 387-720 |
| Cow position: | chrX:42462332-42461983 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 343 |
| Conread position: | 388-711 |
| Cow position: | chrX:39757453-39757790 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 398-706 |
| Cow position: | chrX:5070056-5069737 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 411-711 |
| Cow position: | chrX:22568575-22568262 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 421-711 |
| Cow position: | chrX:9651590-9651288 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 427-722 |
| Cow position: | chrX:28993684-28993378 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 429-711 |
| Cow position: | chrX:20340427-20340134 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 429-711 |
| Cow position: | chrX:32144701-32144406 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 440-711 |
| Cow position: | chrX:12008206-12007925 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 446-711 |
| Cow position: | chrX:42470456-42470180 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 455-704 |
| Cow position: | chrX:30093875-30093614 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 462-722 |
| Cow position: | chrX:22115786-22115515 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 464-712 |
| Cow position: | chrX:35223802-35224060 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 468-727 |
| Cow position: | chrX:21862166-21861903 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 96, 84 |
| Conread position: | 469-705 |
| Cow position: | chrX:12980842-12980596 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 473-716 |
| Cow position: | chrX:31745988-31745734 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 480-711 |
| Cow position: | chrX:37403507-37403266 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 485-709 |
| Cow position: | chrX:31385238-31385474 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 505-711 |
| Cow position: | chrX:27019746-27019960 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 12 |
Show alignments to all cow chromosomes.