Cow genome map
| Conread name: | Liv1-LVRM10139G05 |
| Conread position: | 180-358 |
| Cow position: | chr16:9955272-9955093 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 180-368 |
| Cow position: | chr16:46708507-46708698 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 138, 77 |
| Conread position: | 188-385 |
| Cow position: | chr16:31531482-31531286 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 195-333 |
| Cow position: | chr16:2522596-2522456 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 195-368 |
| Cow position: | chr16:40128947-40128776 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 196-319 |
| Cow position: | chr16:20977913-20977790 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 196-368 |
| Cow position: | chr16:49208209-49208378 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 196-399 |
| Cow position: | chr16:15434175-15433961 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 197-344 |
| Cow position: | chr16:31128606-31128750 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 136, 56 |
| Conread position: | 197-365 |
| Cow position: | chr16:13137971-13137808 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 197-368 |
| Cow position: | chr16:47871134-47871298 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 197-379 |
| Cow position: | chr16:19491246-19491419 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 197-386 |
| Cow position: | chr16:23948448-23948259 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 198-331 |
| Cow position: | chr16:45132636-45132769 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 198-386 |
| Cow position: | chr16:40506959-40507146 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 198-386 |
| Cow position: | chr16:54017343-54017156 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 199-368 |
| Cow position: | chr16:40517265-40517426 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 202-368 |
| Cow position: | chr16:40502716-40502879 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 204-370 |
| Cow position: | chr16:48889604-48889765 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 206-316 |
| Cow position: | chr16:39021778-39021669 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 206-354 |
| Cow position: | chr16:40122376-40122231 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 206-381 |
| Cow position: | chr16:4396884-4396711 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 206-387 |
| Cow position: | chr16:2250217-2250038 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 206-389 |
| Cow position: | chr16:28198300-28198481 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 206-394 |
| Cow position: | chr16:34614216-34614022 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 207-346 |
| Cow position: | chr16:23385516-23385649 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 207-364 |
| Cow position: | chr16:54305054-54304904 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 207-386 |
| Cow position: | chr16:18054822-18054644 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 73, 50 |
| Conread position: | 207-386 |
| Cow position: | chr16:21558436-21558255 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 97 |
| Conread position: | 207-394 |
| Cow position: | chr16:54015053-54014868 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 207-406 |
| Cow position: | chr16:30655604-30655403 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 208-366 |
| Cow position: | chr16:37225337-37225493 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 208-386 |
| Cow position: | chr16:47743347-47743167 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 208-388 |
| Cow position: | chr16:33440175-33439994 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 162, 98 |
| Conread position: | 208-394 |
| Cow position: | chr16:49979393-49979204 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 110 |
| Conread position: | 208-394 |
| Cow position: | chr16:53198106-53198292 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 209-394 |
| Cow position: | chr16:11172124-11171939 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 164, 43 |
| Conread position: | 210-359 |
| Cow position: | chr16:31529426-31529280 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.