Cow genome map
| Conread name: | Liv1-LVRM10139G05 |
| Conread position: | 186-344 |
| Cow position: | chr29:30651833-30651676 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 194-368 |
| Cow position: | chr29:44023515-44023685 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 46 |
| Conread position: | 197-334 |
| Cow position: | chr29:8849308-8849445 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 197-339 |
| Cow position: | chr29:1773500-1773357 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 197-381 |
| Cow position: | chr29:16431922-16431740 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 197-386 |
| Cow position: | chr29:30539318-30539512 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 198-332 |
| Cow position: | chr29:2541472-2541336 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 198-332 |
| Cow position: | chr29:19110145-19110011 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 198-368 |
| Cow position: | chr29:7353691-7353518 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 198-386 |
| Cow position: | chr29:11361151-11360968 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 198-394 |
| Cow position: | chr29:15521152-15521353 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 200-394 |
| Cow position: | chr29:24139975-24140173 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 206-331 |
| Cow position: | chr29:17212040-17212161 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 206-368 |
| Cow position: | chr29:29128476-29128636 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 206-368 |
| Cow position: | chr29:32744355-32744515 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 206-386 |
| Cow position: | chr29:29456052-29455875 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 207-354 |
| Cow position: | chr29:20049490-20049639 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 207-354 |
| Cow position: | chr29:29564302-29564157 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 207-387 |
| Cow position: | chr29:1447336-1447158 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 167, 11 |
| Conread position: | 207-389 |
| Cow position: | chr29:42909990-42909805 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 208-394 |
| Cow position: | chr29:30355552-30355741 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 208-394 |
| Cow position: | chr29:39295890-39296077 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 166, 98 |
| Conread position: | 208-394 |
| Cow position: | chr29:40443043-40442857 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 208-397 |
| Cow position: | chr29:13500889-13500702 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 209-368 |
| Cow position: | chr29:40633018-40632863 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 209-394 |
| Cow position: | chr29:10625719-10625904 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 174, 49 |
| Conread position: | 209-394 |
| Cow position: | chr29:36004947-36004761 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 209-394 |
| Cow position: | chr29:39532174-39532360 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 214-394 |
| Cow position: | chr29:1900835-1900653 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 219-365 |
| Cow position: | chr29:5778174-5778030 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 222-385 |
| Cow position: | chr29:21307202-21307042 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 227-386 |
| Cow position: | chr29:6744131-6743975 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 31 |
Show alignments to all cow chromosomes.