Cow genome map
| Conread name: | Liv1-LVRM10139G05 |
| Conread position: | 177-394 |
| Cow position: | chr9:55033396-55033179 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 196-368 |
| Cow position: | chr9:6594530-6594360 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 197-368 |
| Cow position: | chr9:56929110-56928945 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 197-386 |
| Cow position: | chr9:10773100-10772912 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 197-394 |
| Cow position: | chr9:34315367-34315159 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 8, 120 |
| Conread position: | 198-331 |
| Cow position: | chr9:60189555-60189423 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 198-371 |
| Cow position: | chr9:36602824-36602656 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 198-386 |
| Cow position: | chr9:32609057-32609242 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 198-387 |
| Cow position: | chr9:11418105-11418292 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 198-389 |
| Cow position: | chr9:8203829-8204019 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 198-390 |
| Cow position: | chr9:6316903-6317101 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 198-393 |
| Cow position: | chr9:6655846-6656040 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 198-394 |
| Cow position: | chr9:44559795-44559992 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 198-396 |
| Cow position: | chr9:60816748-60816553 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 199-368 |
| Cow position: | chr9:64600552-64600385 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 206-366 |
| Cow position: | chr9:34701000-34700845 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 206-386 |
| Cow position: | chr9:47438723-47438902 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 206-394 |
| Cow position: | chr9:63411084-63411274 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 126, 113 |
| Conread position: | 207-368 |
| Cow position: | chr9:12363975-12364133 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 207-386 |
| Cow position: | chr9:7094199-7094022 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 207-394 |
| Cow position: | chr9:11315922-11315734 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 155, 97 |
| Conread position: | 207-394 |
| Cow position: | chr9:20984281-20984093 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 207-394 |
| Cow position: | chr9:48610297-48610486 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 208-354 |
| Cow position: | chr9:9391136-9390994 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 208-390 |
| Cow position: | chr9:62635083-62635266 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 208-392 |
| Cow position: | chr9:25032404-25032587 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 166, 50 |
| Conread position: | 208-394 |
| Cow position: | chr9:6164080-6163886 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 98 |
| Conread position: | 209-366 |
| Cow position: | chr9:10896485-10896639 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 218-394 |
| Cow position: | chr9:9561699-9561876 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 220-359 |
| Cow position: | chr9:10894668-10894533 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 231-389 |
| Cow position: | chr9:12861118-12861277 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 233-394 |
| Cow position: | chr9:31583594-31583756 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 23 |
Show alignments to all cow chromosomes.