Cow genome map
| Conread name: | Liv1-LVRM10139G05 |
| Conread position: | 196-394 |
| Cow position: | chrX:38138904-38139097 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 197-353 |
| Cow position: | chrX:38630883-38630733 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 198-368 |
| Cow position: | chrX:42066619-42066449 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 198-368 |
| Cow position: | chrX:42558538-42558370 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 198-386 |
| Cow position: | chrX:11840548-11840735 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 198-386 |
| Cow position: | chrX:42051252-42051064 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 198-394 |
| Cow position: | chrX:25219324-25219130 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 204-394 |
| Cow position: | chrX:31918953-31919141 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 179, 54 |
| Conread position: | 206-386 |
| Cow position: | chrX:29901512-29901331 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 206-394 |
| Cow position: | chrX:803070-802879 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 206-394 |
| Cow position: | chrX:37241742-37241556 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 206-394 |
| Cow position: | chrX:39427306-39427496 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 207-315 |
| Cow position: | chrX:24619972-24620081 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 207-366 |
| Cow position: | chrX:11810012-11810171 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 207-367 |
| Cow position: | chrX:6054531-6054692 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 49 |
| Conread position: | 207-386 |
| Cow position: | chrX:44191556-44191735 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 207-394 |
| Cow position: | chrX:23364109-23364298 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 207-394 |
| Cow position: | chrX:42549924-42549737 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 176, 99 |
| Conread position: | 207-394 |
| Cow position: | chrX:42559202-42559396 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 207-406 |
| Cow position: | chrX:45755633-45755438 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 208-366 |
| Cow position: | chrX:40597085-40597238 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 209-390 |
| Cow position: | chrX:1340316-1340493 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 84 |
| Conread position: | 209-394 |
| Cow position: | chrX:31908757-31908942 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 167, 49 |
| Conread position: | 231-372 |
| Cow position: | chrX:31465663-31465802 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 26 |
Show alignments to all cow chromosomes.