Cow genome map
| Conread name: | Liv1-LVRM10156A07 |
| Conread position: | 1-111 |
| Cow position: | chr13:20605909-20606019 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-111 |
| Cow position: | chr13:51821682-51821790 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-114 |
| Cow position: | chr13:1780043-1779930 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-121 |
| Cow position: | chr13:26261584-26261708 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-121 |
| Cow position: | chr13:37069559-37069440 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-122 |
| Cow position: | chr13:58043839-58043716 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-123 |
| Cow position: | chr13:25531578-25531699 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-123 |
| Cow position: | chr13:29671229-29671352 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-123 |
| Cow position: | chr13:33875872-33875755 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-123 |
| Cow position: | chr13:45022998-45023123 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-123 |
| Cow position: | chr13:61166248-61166370 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 1-124 |
| Cow position: | chr13:5091451-5091578 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:1042746-1042879 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:1155498-1155621 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:5263076-5263203 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 1-125 |
| Cow position: | chr13:12202575-12202453 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:14927449-14927322 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-125 |
| Cow position: | chr13:15869329-15869209 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:17800282-17800159 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:18166940-18166820 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:21235475-21235600 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 109 |
| Conread position: | 1-125 |
| Cow position: | chr13:23166886-23167010 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:23270003-23270125 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:24369794-24369667 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-125 |
| Cow position: | chr13:25927002-25926877 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:33352157-33352278 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:33517714-33517836 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:34508086-34507957 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:37516926-37517050 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:44323112-44322987 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 109 |
| Conread position: | 1-125 |
| Cow position: | chr13:45353256-45353130 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:54344986-54344858 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:60429868-60429988 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-127 |
| Cow position: | chr13:60690512-60690642 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:12244806-12244934 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:21276065-21275939 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:38277927-38278051 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:60974288-60974166 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:21039388-21039519 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-132 |
| Cow position: | chr13:34728627-34728756 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-135 |
| Cow position: | chr13:34052391-34052525 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-135 |
| Cow position: | chr13:37981542-37981671 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 82, 65 |
| Conread position: | 1-141 |
| Cow position: | chr13:18989915-18989777 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-107 |
| Cow position: | chr13:14576879-14576774 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-125 |
| Cow position: | chr13:2339639-2339516 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-125 |
| Cow position: | chr13:46181998-46181878 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 2-134 |
| Cow position: | chr13:53308707-53308571 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 5-114 |
| Cow position: | chr13:20530935-20531044 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-124 |
| Cow position: | chr13:57475225-57475329 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.