Cow genome map
| Conread name: | Liv1-LVRM10156A07 |
| Conread position: | 1-111 |
| Cow position: | chr4:27997453-27997565 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 1-118 |
| Cow position: | chr4:38945813-38945933 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-119 |
| Cow position: | chr4:39231755-39231630 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-121 |
| Cow position: | chr4:33612595-33612472 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-123 |
| Cow position: | chr4:22051701-22051580 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 1-123 |
| Cow position: | chr4:41867212-41867333 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-124 |
| Cow position: | chr4:1915810-1915688 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-124 |
| Cow position: | chr4:5461092-5460970 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 1-124 |
| Cow position: | chr4:7571177-7571299 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 109 |
| Conread position: | 1-124 |
| Cow position: | chr4:11901795-11901671 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-124 |
| Cow position: | chr4:12260013-12259890 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-124 |
| Cow position: | chr4:23647075-23646952 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:10412146-10412268 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:10731986-10732114 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:11090919-11090801 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:14414578-14414451 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:16637831-16637708 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 93 |
| Conread position: | 1-125 |
| Cow position: | chr4:19322311-19322191 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:20299038-20299164 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 1-125 |
| Cow position: | chr4:22138468-22138340 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:23445284-23445158 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 1-125 |
| Cow position: | chr4:24119141-24119017 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:25879164-25879289 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 1-125 |
| Cow position: | chr4:27540389-27540512 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:30974104-30974231 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 1-125 |
| Cow position: | chr4:34310687-34310559 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:39128298-39128425 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:41908024-41907901 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:46370578-46370706 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:52748690-52748567 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:53209003-53209130 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:53999739-53999618 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:54501681-54501558 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:56233455-56233578 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:56409949-56410079 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr4:56514171-56514045 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 1-125 |
| Cow position: | chr4:59008602-59008478 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-126 |
| Cow position: | chr4:53832813-53832940 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 1-126 |
| Cow position: | chr4:55508648-55508522 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-127 |
| Cow position: | chr4:40410352-40410228 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-127 |
| Cow position: | chr4:46274961-46275085 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 81 |
| Conread position: | 1-128 |
| Cow position: | chr4:2141513-2141638 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-128 |
| Cow position: | chr4:37620120-37619994 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-128 |
| Cow position: | chr4:38999194-38999318 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-128 |
| Cow position: | chr4:41292212-41292083 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-128 |
| Cow position: | chr4:46591427-46591559 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-131 |
| Cow position: | chr4:23060235-23060099 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-134 |
| Cow position: | chr4:53763350-53763218 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-168 |
| Cow position: | chr4:30690492-30690656 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 128, 65 |
| Conread position: | 1-170 |
| Cow position: | chr4:46385810-46385636 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-124 |
| Cow position: | chr4:2536601-2536721 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-125 |
| Cow position: | chr4:44612771-44612895 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 3-125 |
| Cow position: | chr4:14743029-14743153 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-125 |
| Cow position: | chr4:21058616-21058488 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-125 |
| Cow position: | chr4:41602618-41602740 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 3-135 |
| Cow position: | chr4:61999684-61999556 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 5-124 |
| Cow position: | chr4:11099897-11099779 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 5-125 |
| Cow position: | chr4:25359380-25359501 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 11-125 |
| Cow position: | chr4:27687701-27687815 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.