Cow genome map
| Conread name: | Liv1-LVRM10156A07 |
| Conread position: | 1-114 |
| Cow position: | chr5:1247077-1247190 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-114 |
| Cow position: | chr5:26541094-26541206 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-118 |
| Cow position: | chr5:9390336-9390457 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-122 |
| Cow position: | chr5:45036822-45036943 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chr5:4551932-4552058 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-123 |
| Cow position: | chr5:35969343-35969464 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:16184890-16185010 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:26133273-26133148 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:27419920-27419799 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:34638686-34638807 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:43474648-43474770 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:47547916-47547794 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-124 |
| Cow position: | chr5:62142471-62142594 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:2500388-2500260 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:5938125-5938250 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:6504079-6503953 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:8994765-8994643 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:9090223-9090096 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-125 |
| Cow position: | chr5:12563206-12563081 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:14420544-14420414 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:24348912-24349032 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:26377866-26377745 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:28224255-28224378 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 115, 16 |
| Conread position: | 1-125 |
| Cow position: | chr5:30253545-30253665 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:34528362-34528486 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 108 |
| Conread position: | 1-125 |
| Cow position: | chr5:39447730-39447606 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 1-125 |
| Cow position: | chr5:40889483-40889357 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:44994237-44994114 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:45226023-45225900 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:45705848-45705974 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:47888914-47888785 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:49362190-49362062 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 1-125 |
| Cow position: | chr5:53835515-53835637 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:56135168-56135043 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:56820459-56820338 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:58144803-58144677 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:61455555-61455683 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:64844317-64844197 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:65752657-65752781 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-128 |
| Cow position: | chr5:43738151-43738028 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-128 |
| Cow position: | chr5:58855904-58856030 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-131 |
| Cow position: | chr5:66280991-66280862 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-125 |
| Cow position: | chr5:45026115-45025993 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-125 |
| Cow position: | chr5:59443450-59443324 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 110 |
| Conread position: | 2-132 |
| Cow position: | chr5:14904271-14904144 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-107 |
| Cow position: | chr5:18573973-18574077 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-123 |
| Cow position: | chr5:54311136-54311257 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 3-125 |
| Cow position: | chr5:47317167-47317047 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-128 |
| Cow position: | chr5:6033042-6033167 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 6-123 |
| Cow position: | chr5:56137238-56137120 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 11-125 |
| Cow position: | chr5:69461145-69461258 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 11-125 |
| Cow position: | chr5:71454784-71454671 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.