Cow genome map
| Conread name: | Liv1-LVRM10156A07 |
| Conread position: | 1-113 |
| Cow position: | chrX:7497045-7497157 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-114 |
| Cow position: | chrX:4633049-4632937 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-114 |
| Cow position: | chrX:6639927-6640040 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-114 |
| Cow position: | chrX:21665792-21665679 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-118 |
| Cow position: | chrX:23091683-23091799 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-121 |
| Cow position: | chrX:34441649-34441530 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-122 |
| Cow position: | chrX:42247382-42247262 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-123 |
| Cow position: | chrX:7382125-7382247 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chrX:9635379-9635258 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-123 |
| Cow position: | chrX:39938721-39938596 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:9416891-9416769 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:17725776-17725898 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:19188738-19188862 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 1-124 |
| Cow position: | chrX:21795297-21795420 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:26876080-26875959 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:27772158-27772037 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-124 |
| Cow position: | chrX:34238522-34238646 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:6234647-6234527 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:6278704-6278575 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:6544058-6544181 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:8797049-8797178 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:10831695-10831568 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 1-125 |
| Cow position: | chrX:11073387-11073264 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 1-125 |
| Cow position: | chrX:11655890-11656017 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 1-125 |
| Cow position: | chrX:11856231-11856354 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:12309588-12309460 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 1-125 |
| Cow position: | chrX:14924802-14924926 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 1-125 |
| Cow position: | chrX:15007349-15007224 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 1-125 |
| Cow position: | chrX:15139742-15139620 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:20697806-20697679 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:21593085-21593213 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:22074602-22074725 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:23514216-23514090 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 1-125 |
| Cow position: | chrX:25237978-25238102 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:26285781-26285907 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:29509642-29509516 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:29542417-29542294 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:30833044-30832922 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:30963070-30962948 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:31443020-31442896 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:32020320-32020194 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:34401799-34401923 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 1-125 |
| Cow position: | chrX:34543589-34543713 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 1-125 |
| Cow position: | chrX:35388104-35387977 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-125 |
| Cow position: | chrX:35609788-35609914 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:36778209-36778337 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:36975751-36975877 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:38963908-38964029 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:40452411-40452284 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 1-125 |
| Cow position: | chrX:41167163-41167039 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:41743714-41743837 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:42492713-42492588 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:42855210-42855340 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:42874779-42874909 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-125 |
| Cow position: | chrX:42994416-42994542 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 1-127 |
| Cow position: | chrX:7336630-7336756 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 1-127 |
| Cow position: | chrX:18695118-18694997 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-128 |
| Cow position: | chrX:3579746-3579873 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-128 |
| Cow position: | chrX:35542693-35542823 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 1-131 |
| Cow position: | chrX:26625875-26625739 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 114 |
| Conread position: | 1-134 |
| Cow position: | chrX:33639773-33639904 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-141 |
| Cow position: | chrX:38549250-38549396 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:3161212-3161064 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 136 |
| Conread position: | 1-164 |
| Cow position: | chrX:17908482-17908322 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-125 |
| Cow position: | chrX:16996310-16996431 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 110, 64 |
| Conread position: | 4-124 |
| Cow position: | chrX:40116226-40116345 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 5-124 |
| Cow position: | chrX:11589783-11589663 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 5-125 |
| Cow position: | chrX:34502724-34502847 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 6-114 |
| Cow position: | chrX:18812061-18812169 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-127 |
| Cow position: | chrX:32820847-32820957 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 23-134 |
| Cow position: | chrX:24201010-24201119 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.