Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-152 |
| Cow position: | chr10:29631860-29631703 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-203 |
| Cow position: | chr10:26597525-26597735 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-459 |
| Cow position: | chr10:38537586-38537124 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 20 |
| Conread position: | 1-545 |
| Cow position: | chr10:29110230-29109688 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 1-551 |
| Cow position: | chr10:50133159-50132618 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 349 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 1-552 |
| Cow position: | chr10:29845737-29845184 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 195 |
| Conread position: | 1-552 |
| Cow position: | chr10:50135472-50136036 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 1-552 |
| Cow position: | chr10:53246496-53245954 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 363 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 3-361 |
| Cow position: | chr10:42752043-42752404 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 3-488 |
| Cow position: | chr10:41158354-41158841 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 257 |
| Conread position: | 3-531 |
| Cow position: | chr10:17433256-17433803 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 231 |
| Conread position: | 3-536 |
| Cow position: | chr10:38544998-38544479 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 33 |
| Conread position: | 3-542 |
| Cow position: | chr10:27664352-27663808 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-549 |
| Cow position: | chr10:11684733-11684167 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-549 |
| Cow position: | chr10:16477667-16478219 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 3-552 |
| Cow position: | chr10:1665622-1665063 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 3-552 |
| Cow position: | chr10:14804747-14805314 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 201 |
| Conread position: | 3-552 |
| Cow position: | chr10:14862601-14863126 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 3-552 |
| Cow position: | chr10:21399759-21399215 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 264 |
| Conread position: | 3-552 |
| Cow position: | chr10:21739837-21739287 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-552 |
| Cow position: | chr10:39779208-39778653 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 300 |
| Conread position: | 3-552 |
| Cow position: | chr10:40151333-40150795 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 264 |
| Conread position: | 3-552 |
| Cow position: | chr10:41568012-41568569 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 3-552 |
| Cow position: | chr10:41877829-41878391 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-552 |
| Cow position: | chr10:44708703-44708143 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 244 |
| Conread position: | 3-552 |
| Cow position: | chr10:47907843-47908402 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 267 |
| Conread position: | 3-552 |
| Cow position: | chr10:58097104-58096562 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 193 |
| Conread position: | 4-552 |
| Cow position: | chr10:57556426-57555867 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 188 |
| Conread position: | 5-391 |
| Cow position: | chr10:21480851-21481239 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 5-549 |
| Cow position: | chr10:2120098-2119536 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 5-552 |
| Cow position: | chr10:55094181-55094734 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 190 |
| Conread position: | 6-197 |
| Cow position: | chr10:21487837-21488028 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 113 |
| Conread position: | 6-523 |
| Cow position: | chr10:16926450-16926976 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 6-552 |
| Cow position: | chr10:1378422-1378964 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr10:7281172-7280637 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 185 |
| Conread position: | 6-552 |
| Cow position: | chr10:14334933-14334366 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr10:19512509-19513045 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 183 |
| Conread position: | 6-552 |
| Cow position: | chr10:30684597-30684024 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 207 |
| Conread position: | 6-552 |
| Cow position: | chr10:32701644-32702195 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 123 |
| Conread position: | 6-552 |
| Cow position: | chr10:38344444-38343889 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 6-552 |
| Cow position: | chr10:39040392-39039826 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 298 |
| Conread position: | 6-552 |
| Cow position: | chr10:57989075-57988526 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 36 |
| Conread position: | 9-551 |
| Cow position: | chr10:64145849-64146394 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 11-546 |
| Cow position: | chr10:58812826-58812300 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 31-551 |
| Cow position: | chr10:38849246-38849748 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 11 |
| Conread position: | 32-296 |
| Cow position: | chr10:21899258-21898996 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 117 |
| Conread position: | 39-502 |
| Cow position: | chr10:10798145-10797674 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 87 |
| Conread position: | 39-552 |
| Cow position: | chr10:11821704-11822217 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 209 |
| Conread position: | 50-552 |
| Cow position: | chr10:28256454-28255948 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 142 |
| Conread position: | 69-552 |
| Cow position: | chr10:22584041-22583545 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 370 |
| Conread position: | 82-295 |
| Cow position: | chr10:39439346-39439569 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 84-438 |
| Cow position: | chr10:6243-6582 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 114 |
| Conread position: | 84-552 |
| Cow position: | chr10:60360890-60361364 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 86-352 |
| Cow position: | chr10:31538788-31539052 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 128, 102 |
| Conread position: | 102-540 |
| Cow position: | chr10:53321377-53320937 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 46 |
| Conread position: | 104-551 |
| Cow position: | chr10:20375815-20375371 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 109-552 |
| Cow position: | chr10:36469428-36468995 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 132-552 |
| Cow position: | chr10:62407737-62407309 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 160-552 |
| Cow position: | chr10:55285018-55285427 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 369 |
| Conread position: | 162-390 |
| Cow position: | chr10:57406838-57406603 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 177-552 |
| Cow position: | chr10:39815312-39814930 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 170 |
| Conread position: | 188-551 |
| Cow position: | chr10:126383-126756 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 193-552 |
| Cow position: | chr10:21488067-21488426 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 195 |
| Conread position: | 194-454 |
| Cow position: | chr10:58928341-58928600 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 195-552 |
| Cow position: | chr10:29631696-29631330 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 208-552 |
| Cow position: | chr10:10583233-10583590 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 340 |
| Conread position: | 218-551 |
| Cow position: | chr10:20382882-20382559 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 242-552 |
| Cow position: | chr10:54931044-54930738 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 252-552 |
| Cow position: | chr10:51774045-51773746 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 261-448 |
| Cow position: | chr10:8291107-8291299 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 312-552 |
| Cow position: | chr10:37771107-37771353 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 58, 207 |
| Conread position: | 332-552 |
| Cow position: | chr10:47787930-47788148 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 365-552 |
| Cow position: | chr10:68160356-68160169 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 11 |
Show alignments to all cow chromosomes.