Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 157
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 519
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               347
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               197, 5
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 145
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 280
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 238
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 300
               

               Conread position:
               2-267
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 66
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 173
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               3-498
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               3-545
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               3-549
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 323
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 191
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               4-549
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 191
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 443
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 191
               

               Conread position:
               6-523
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 318
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 178
               

               Conread position:
               6-550
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 482
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 296
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 191
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 237
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 186
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 41
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 386
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 401
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 175
               

               Conread position:
               8-387
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               8-524
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 188
               

               Conread position:
               8-550
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 11
               

               Conread position:
               9-551
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               357
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               23, 169
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 181
               

               Conread position:
               31-552
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               335
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               39-294
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 149
               

               Conread position:
               39-536
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 160
               

               Conread position:
               65-550
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 180
               

               Conread position:
               66-552
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               81-550
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 99
               

               Conread position:
               84-419
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 106
               

               Conread position:
               95-552
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 35
               

               Conread position:
               121-475
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 176
               

               Conread position:
               135-552
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               147-551
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               147-552
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               154-552
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               155-552
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               164-368
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               167-540
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               180-552
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 116
               

               Conread position:
               189-359
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               201-324
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               223-550
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               153, 40
               

               Conread position:
               231-421
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               251-552
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               273-552
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               301-552
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               324-552
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 189
               

               Conread position:
               329-549
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               340-552
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               368-552
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               375-552
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               375-552
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               88, 0
               
Show alignments to all cow chromosomes.