Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-552 |
| Cow position: | chr12:7864033-7863480 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 357 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 1-552 |
| Cow position: | chr12:21942574-21943131 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 3-344 |
| Cow position: | chr12:25554539-25554180 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 35, 232 |
| Conread position: | 3-452 |
| Cow position: | chr12:11203081-11203534 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 3-550 |
| Cow position: | chr12:37559829-37560405 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 3-552 |
| Cow position: | chr12:21387405-21386847 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-552 |
| Cow position: | chr12:32654376-32654951 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 5-529 |
| Cow position: | chr12:8677259-8676719 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 124 |
| Conread position: | 6-319 |
| Cow position: | chr12:14661788-14661471 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 167 |
| Conread position: | 6-544 |
| Cow position: | chr12:25262626-25262080 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 295 |
| Conread position: | 6-552 |
| Cow position: | chr12:1403334-1403897 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr12:6405802-6405239 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 190 |
| Conread position: | 6-552 |
| Cow position: | chr12:11099076-11099621 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 160 |
| Conread position: | 6-552 |
| Cow position: | chr12:27855124-27854568 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 189 |
| Conread position: | 6-552 |
| Cow position: | chr12:27932065-27931514 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 444 |
| Conread position: | 9-552 |
| Cow position: | chr12:600512-599975 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 142 |
| Conread position: | 10-292 |
| Cow position: | chr12:22204898-22204613 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 186 |
| Conread position: | 10-298 |
| Cow position: | chr12:21198806-21199095 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 10-552 |
| Cow position: | chr12:35345407-35345932 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 15-534 |
| Cow position: | chr12:28004786-28005270 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 39-306 |
| Cow position: | chr12:366752-366486 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 222, 17 |
| Conread position: | 50-552 |
| Cow position: | chr12:8139223-8138745 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 60-546 |
| Cow position: | chr12:23141298-23140797 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 65-350 |
| Cow position: | chr12:32678033-32677761 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 69-552 |
| Cow position: | chr12:25100166-25099680 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 21 |
| Conread position: | 78-537 |
| Cow position: | chr12:23162012-23161555 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 96 |
| Conread position: | 100-525 |
| Cow position: | chr12:41465552-41465130 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 158, 56 |
| Conread position: | 108-298 |
| Cow position: | chr12:19221936-19222126 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 162, 71 |
| Conread position: | 167-552 |
| Cow position: | chr12:48471872-48471487 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 170-532 |
| Cow position: | chr12:1776958-1776595 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 193-552 |
| Cow position: | chr12:33119181-33119568 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 163 |
| Conread position: | 194-454 |
| Cow position: | chr12:1870336-1870595 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 213-466 |
| Cow position: | chr12:35313343-35313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 216-552 |
| Cow position: | chr12:20604198-20604532 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 218-551 |
| Cow position: | chr12:35109745-35110070 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 263-552 |
| Cow position: | chr12:1888461-1888164 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 268-519 |
| Cow position: | chr12:15036670-15036420 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 270-552 |
| Cow position: | chr12:20843724-20843999 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 393-544 |
| Cow position: | chr12:24433850-24433697 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.