Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-175 |
| Cow position: | chr13:30238854-30239030 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 1-290 |
| Cow position: | chr13:20541428-20541145 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 1-322 |
| Cow position: | chr13:26844645-26844951 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 122 |
| Conread position: | 1-373 |
| Cow position: | chr13:34154144-34153767 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 192 |
| Conread position: | 1-472 |
| Cow position: | chr13:34324943-34324460 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-552 |
| Cow position: | chr13:5625389-5624818 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 457 |
| Conread position: | 1-552 |
| Cow position: | chr13:15450509-15449965 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 1-552 |
| Cow position: | chr13:30654764-30654219 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 1-552 |
| Cow position: | chr13:34938081-34938619 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 190 |
| Conread position: | 3-344 |
| Cow position: | chr13:34424380-34424724 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 3-365 |
| Cow position: | chr13:30278238-30278596 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 3-411 |
| Cow position: | chr13:16254765-16254351 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 3-413 |
| Cow position: | chr13:60466945-60467363 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 3-523 |
| Cow position: | chr13:5628189-5627698 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 3-538 |
| Cow position: | chr13:17309091-17309632 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-551 |
| Cow position: | chr13:57024317-57024863 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 3-552 |
| Cow position: | chr13:14178219-14177674 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 3-552 |
| Cow position: | chr13:25692303-25692847 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 114 |
| Conread position: | 3-552 |
| Cow position: | chr13:47229386-47228822 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 400 |
| Conread position: | 4-537 |
| Cow position: | chr13:11798091-11797562 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 5-547 |
| Cow position: | chr13:1592531-1591988 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 188 |
| Conread position: | 5-552 |
| Cow position: | chr13:21839579-21839018 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 187 |
| Conread position: | 5-552 |
| Cow position: | chr13:35757893-35758461 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 348 |
| Conread position: | 6-322 |
| Cow position: | chr13:34765832-34765519 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 6-543 |
| Cow position: | chr13:43982475-43981943 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 260 |
| Conread position: | 6-546 |
| Cow position: | chr13:31730253-31729724 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 6-546 |
| Cow position: | chr13:34049360-34049906 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 6-552 |
| Cow position: | chr13:6667511-6666958 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 6-552 |
| Cow position: | chr13:13900490-13901043 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-552 |
| Cow position: | chr13:31611685-31611133 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-552 |
| Cow position: | chr13:34041712-34041159 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 113 |
| Conread position: | 9-547 |
| Cow position: | chr13:30303908-30304468 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 252 |
| Conread position: | 9-552 |
| Cow position: | chr13:4484422-4484967 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 53 |
| Conread position: | 10-549 |
| Cow position: | chr13:3653694-3653141 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 10-552 |
| Cow position: | chr13:15519881-15519350 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 186 |
| Conread position: | 10-552 |
| Cow position: | chr13:15923754-15923204 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 186 |
| Conread position: | 21-552 |
| Cow position: | chr13:9045408-9045939 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 168 |
| Conread position: | 53-552 |
| Cow position: | chr13:14402426-14401931 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 140 |
| Conread position: | 56-552 |
| Cow position: | chr13:43590006-43590499 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 137 |
| Conread position: | 87-298 |
| Cow position: | chr13:47861533-47861743 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 181, 7 |
| Conread position: | 140-552 |
| Cow position: | chr13:23002253-23001833 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 161-552 |
| Cow position: | chr13:11794261-11793906 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 169-552 |
| Cow position: | chr13:678537-678926 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 184-552 |
| Cow position: | chr13:30239125-30239490 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 189-552 |
| Cow position: | chr13:48358450-48358809 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 235-552 |
| Cow position: | chr13:34030473-34030782 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 244-552 |
| Cow position: | chr13:17998418-17998734 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 317-552 |
| Cow position: | chr13:5501058-5500823 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 146, 12 |
| Conread position: | 406-552 |
| Cow position: | chr13:34764800-34764656 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 77 |
Show alignments to all cow chromosomes.